|
0.42487046
|
jalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwicejalview.io.CrossRef2xmlTests.openCrossrefsForEnsemblTwice
|
1PASS
|
|
|
0.380829
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettingsjalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettings
|
1PASS
|
|
|
0.37392056
|
jalview.commands.EditCommandTest.testCut_withFeatures_exhaustivejalview.commands.EditCommandTest.testCut_withFeatures_exhaustive
|
1PASS
|
|
|
0.34196892
|
jalview.project.Jalview2xmlTests.viewRefPdbAnnotationjalview.project.Jalview2xmlTests.viewRefPdbAnnotation
|
1PASS
|
|
|
0.335924
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviewsjalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviews
|
1PASS
|
|
|
0.32728842
|
jalview.datamodel.AlignmentTest.testPropagateInsertionsjalview.datamodel.AlignmentTest.testPropagateInsertions
|
1PASS
|
|
|
0.328152
|
jalview.gui.AlignViewportTest.testGetSelectionAsNewSequences_withContactMatricesjalview.gui.AlignViewportTest.testGetSelectionAsNewSequences_withContactMatrices
|
1PASS
|
|
|
0.32901555
|
jalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMadejalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMade
|
1PASS
|
|
|
0.32901555
|
jalview.project.Jalview2xmlTests.testCopyViewSettingsjalview.project.Jalview2xmlTests.testCopyViewSettings
|
1PASS
|
|
|
0.32901555
|
jalview.project.Jalview2xmlTests.gatherViewsHerejalview.project.Jalview2xmlTests.gatherViewsHere
|
1PASS
|
|
|
0.31606218
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.31606218
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.31606218
|
jalview.datamodel.SequenceTest.testDeriveSequence_existingDatasetjalview.datamodel.SequenceTest.testDeriveSequence_existingDataset
|
1PASS
|
|
|
0.31606218
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.31606218
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.31433505
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.31433505
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.31433505
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.31519863
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.31519863
|
jalview.io.StockholmFileTest.pfamFileIOjalview.io.StockholmFileTest.pfamFileIO
|
1PASS
|
|
|
0.31433505
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.30656305
|
jalview.gui.AnnotationLabelsTest2.testIdWidthChangesjalview.gui.AnnotationLabelsTest2.testIdWidthChanges
|
1PASS
|
|
|
0.30656305
|
jalview.gui.AnnotationLabelsTest2.testIdWidthNoChangesjalview.gui.AnnotationLabelsTest2.testIdWidthNoChanges
|
1PASS
|
|
|
0.30656305
|
jalview.gui.AnnotationLabelsTest2.testIdWidthNoChangesjalview.gui.AnnotationLabelsTest2.testIdWidthNoChanges
|
1PASS
|
|
|
0.30656305
|
jalview.gui.AnnotationLabelsTest2.testIdWidthChangesjalview.gui.AnnotationLabelsTest2.testIdWidthChanges
|
1PASS
|
|
|
0.30656305
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.30656305
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.30656305
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.30656305
|
jalview.analysis.AlignmentUtilsTests.testExpandContext_annotationjalview.analysis.AlignmentUtilsTests.testExpandContext_annotation
|
1PASS
|
|
|
0.30656305
|
jalview.ext.jmol.JmolParserTest.testAlignmentLoaderjalview.ext.jmol.JmolParserTest.testAlignmentLoader
|
1PASS
|
|
|
0.3031088
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.3031088
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.30224526
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.3031088
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.30224526
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.3031088
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.30397236
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.3031088
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.30224526
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.30224526
|
jalview.bin.CommandsTest.structureImageAnnotationsOutputTestjalview.bin.CommandsTest.structureImageAnnotationsOutputTest
|
1PASS
|
|
|
0.29706392
|
jalview.analysis.AlignmentUtilsTests.testAlignAsSameSequencesMultipleSubSeqjalview.analysis.AlignmentUtilsTests.testAlignAsSameSequencesMultipleSubSeq
|
1PASS
|
|
|
0.29533678
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.29533678
|
jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest
|
1PASS
|
|
|
0.29015544
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.29015544
|
jalview.bin.CommandsTest.structureImageOutputTestjalview.bin.CommandsTest.structureImageOutputTest
|
1PASS
|
|
|
0.291019
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.28842834
|
jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol
|
1PASS
|
|
|
0.2867012
|
jalview.bin.CommandsTest2.structureOpeningArgsTestjalview.bin.CommandsTest2.structureOpeningArgsTest
|
1PASS
|
|
|
0.28151986
|
jalview.commands.EditCommandTest.testUndo_cutjalview.commands.EditCommandTest.testUndo_cut
|
1PASS
|
|
|
0.28151986
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsAndHiddenColumns
|
1PASS
|
|
|
0.28151986
|
jalview.io.StockholmFileTest.rfamFileIOjalview.io.StockholmFileTest.rfamFileIO
|
1PASS
|
|
|
0.27979276
|
jalview.commands.EditCommandTest.testCut_withFeaturesjalview.commands.EditCommandTest.testCut_withFeatures
|
1PASS
|
|
|
0.27979276
|
jalview.io.JSONFileTest.testGrpParsed_colourNonejalview.io.JSONFileTest.testGrpParsed_colourNone
|
1PASS
|
|
|
0.27633852
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntryjalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntry
|
1PASS
|
|
|
0.27547497
|
jalview.datamodel.PAEContactMatrixTest.testSeqAssociatedPAEMatrixjalview.datamodel.PAEContactMatrixTest.testSeqAssociatedPAEMatrix
|
1PASS
|
|
|
0.27633852
|
jalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodonsjalview.analysis.DnaTest.testTranslateCdna_withUntranslatableCodons
|
1PASS
|
|
|
0.27633852
|
jalview.analysis.AlignmentUtilsTests.testAddReferenceAnnotationsjalview.analysis.AlignmentUtilsTests.testAddReferenceAnnotations
|
1PASS
|
|
|
0.27633852
|
jalview.project.Jalview2xmlTests.testRNAStructureRecoveryjalview.project.Jalview2xmlTests.testRNAStructureRecovery
|
1PASS
|
|
|
0.27633852
|
jalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotationjalview.io.AnnotatedPDBFileInputTest.testJalviewProjectRelocationAnnotation
|
1PASS
|
|
|
0.2685665
|
jalview.datamodel.SequenceTest.testCopyPasteStyleDerivesequence_withcontactMatrixAnnjalview.datamodel.SequenceTest.testCopyPasteStyleDerivesequence_withcontactMatrixAnn
|
1PASS
|
|
|
0.26683939
|
jalview.datamodel.SequenceTest.testDeleteChars_withDbRefsAndFeaturesjalview.datamodel.SequenceTest.testDeleteChars_withDbRefsAndFeatures
|
1PASS
|
|
|
0.26683939
|
jalview.commands.EditCommandTest.testCutjalview.commands.EditCommandTest.testCut
|
1PASS
|
|
|
0.2642487
|
jalview.project.Jalview2xmlTests.testPAEsaveRestorejalview.project.Jalview2xmlTests.testPAEsaveRestore
|
1PASS
|
|
|
0.26511225
|
jalview.project.Jalview2xmlTests.testColourByAnnotScoresjalview.project.Jalview2xmlTests.testColourByAnnotScores
|
1PASS
|
|
|
0.26597583
|
jalview.analysis.scoremodels.SecondaryStructureDistanceModelTest.testFindDistances_withSSUndefinedInEitherOneSeqjalview.analysis.scoremodels.SecondaryStructureDistanceModelTest.testFindDistances_withSSUndefinedInEitherOneSeq
|
1PASS
|
|
|
0.26165804
|
jalview.commands.EditCommandTest.testCut_withFeatures5primejalview.commands.EditCommandTest.testCut_withFeatures5prime
|
1PASS
|
|
|
0.2625216
|
jalview.analysis.scoremodels.SecondaryStructureDistanceModelTest.testFindDistances_withGapjalview.analysis.scoremodels.SecondaryStructureDistanceModelTest.testFindDistances_withGap
|
1PASS
|
|
|
0.2599309
|
jalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMol
|
1PASS
|
|
|
0.26079446
|
jalview.datamodel.SequenceTest.testDeleteChars_withGapsjalview.datamodel.SequenceTest.testDeleteChars_withGaps
|
1PASS
|
|
|
0.25647667
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumnjalview.renderer.seqfeatures.FeatureRendererTest.testFindFeaturesAtColumn
|
1PASS
|
|
|
0.25043178
|
jalview.analysis.AlignmentUtilsTests.testAddReferenceContactMapjalview.analysis.AlignmentUtilsTests.testAddReferenceContactMap
|
1PASS
|
|
|
0.24611399
|
jalview.gui.AssociatePDBFileTest.testAssociatePDBFilejalview.gui.AssociatePDBFileTest.testAssociatePDBFile
|
1PASS
|
|
|
0.2417962
|
mc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotationsmc_view.PDBfileTest.testParse_withJmolAddAlignmentAnnotations
|
1PASS
|
|
|
0.24265976
|
jalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNonejalview.io.JSONFileTest.testBioJSONRoundTripWithColourSchemeNone
|
1PASS
|
|
|
0.24093264
|
jalview.io.AnnotationFileIOTest.exampleAnnotationFileIOjalview.io.AnnotationFileIOTest.exampleAnnotationFileIO
|
1PASS
|
|
|
0.23834197
|
jalview.analysis.AverageDistanceEngineTest.testUPGMAEnginejalview.analysis.AverageDistanceEngineTest.testUPGMAEngine
|
1PASS
|
|
|
0.23920552
|
jalview.gui.DesktopTests.testInternalCopyPastejalview.gui.DesktopTests.testInternalCopyPaste
|
1PASS
|
|
|
0.23920552
|
mc_view.PDBfileTest.testParse_withJmol_noAnnotationsmc_view.PDBfileTest.testParse_withJmol_noAnnotations
|
1PASS
|
|
|
0.24006909
|
jalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeaturesjalview.structure.StructureSelectionManagerTest.testSetMapping_seqFeatures
|
1PASS
|
|
|
0.23661485
|
jalview.io.RNAMLfileTest.testRnamlToStockholmIOjalview.io.RNAMLfileTest.testRnamlToStockholmIO
|
1PASS
|
|
|
0.23488773
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResiduejalview.renderer.seqfeatures.FeatureRendererTest.testFindComplementFeaturesAtResidue
|
1PASS
|
|
|
0.23316061
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverAnnotationRowElementColoursjalview.project.Jalview2xmlTests.testStoreAndRecoverAnnotationRowElementColours
|
1PASS
|
|
|
0.23316061
|
jalview.datamodel.PAEContactMatrixTest.testMappableContactMatrixjalview.datamodel.PAEContactMatrixTest.testMappableContactMatrix
|
1PASS
|
|
|
0.23402418
|
jalview.datamodel.AlignmentTest.testPropagateInsertionsOverlapjalview.datamodel.AlignmentTest.testPropagateInsertionsOverlap
|
1PASS
|
|
|
0.23229706
|
jalview.datamodel.SequenceTest.testFindFeaturesjalview.datamodel.SequenceTest.testFindFeatures
|
1PASS
|
|
|
0.23056994
|
jalview.controller.AlignViewControllerTest.testFindColumnsWithFeaturejalview.controller.AlignViewControllerTest.testFindColumnsWithFeature
|
1PASS
|
|
|
0.23143351
|
jalview.analysis.AlignmentUtilsTests.testExpandContextjalview.analysis.AlignmentUtilsTests.testExpandContext
|
1PASS
|
|
|
0.22884284
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverGeneLocusjalview.project.Jalview2xmlTests.testStoreAndRecoverGeneLocus
|
1PASS
|
|
|
0.22366148
|
jalview.datamodel.SequenceTest.testFindPosition_withCursorAndEditsjalview.datamodel.SequenceTest.testFindPosition_withCursorAndEdits
|
1PASS
|
|
|
0.22452505
|
jalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDnajalview.util.MappingUtilsTest.testMapColumnSelection_proteinToDna
|
1PASS
|
|
|
0.22452505
|
jalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumnsjalview.util.MappingUtilsTest.testMapColumnSelection_hiddenColumns
|
1PASS
|
|
|
0.22193436
|
jalview.commands.EditCommandTest.testUndo_multipleCommandsjalview.commands.EditCommandTest.testUndo_multipleCommands
|
1PASS
|
|
|
0.22279793
|
jalview.project.Jalview2xmlTests.testTCoffeeScoresjalview.project.Jalview2xmlTests.testTCoffeeScores
|
1PASS
|
|
|
0.22193436
|
jalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependentjalview.analysis.DnaTest.testTranslateCdna_sequenceOrderIndependent
|
1PASS
|
|
|
0.22020726
|
jalview.analysis.AlignmentSorterTest.testSortByFeature_scorejalview.analysis.AlignmentSorterTest.testSortByFeature_score
|
1PASS
|
|
|
0.21761657
|
jalview.commands.EditCommandTest.testUndo_insertGapjalview.commands.EditCommandTest.testUndo_insertGap
|
1PASS
|
|
|
0.21848014
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_sharedDatasetjalview.util.MappingUtilsTest.testMapSequenceGroup_sharedDataset
|
1PASS
|
|
|
0.21934369
|
jalview.commands.EditCommandTest.testReplace_withGapsjalview.commands.EditCommandTest.testReplace_withGaps
|
1PASS
|
|
|
0.21761657
|
jalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProteinjalview.util.MappingUtilsTest.testMapColumnSelection_dnaToProtein
|
1PASS
|
|
|
0.21761657
|
jalview.commands.EditCommandTest.testUndo_deleteGapjalview.commands.EditCommandTest.testUndo_deleteGap
|
1PASS
|
|
|
0.21761657
|
jalview.commands.EditCommandTest.testUndo_multipleInsertGapsjalview.commands.EditCommandTest.testUndo_multipleInsertGaps
|
1PASS
|
|
|
0.21588947
|
jalview.commands.TrimRegionCommandTest.testTrimRight_withUndoAndRedojalview.commands.TrimRegionCommandTest.testTrimRight_withUndoAndRedo
|
1PASS
|
|
|
0.21588947
|
jalview.io.FeaturesFileTest.simpleGff3FileLoaderjalview.io.FeaturesFileTest.simpleGff3FileLoader
|
1PASS
|
|
|
0.21588947
|
jalview.project.Jalview2xmlTests.testPcaViewAssociationjalview.project.Jalview2xmlTests.testPcaViewAssociation
|
1PASS
|
|
|
0.21157168
|
jalview.util.MappingUtilsTest.testMapEditCommandjalview.util.MappingUtilsTest.testMapEditCommand
|
1PASS
|
|
|
0.21243523
|
jalview.analysis.AlignmentUtilsTests.testAlignAsSameSequencesjalview.analysis.AlignmentUtilsTests.testAlignAsSameSequences
|
1PASS
|
|
|
0.2132988
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_regionjalview.util.MappingUtilsTest.testMapSequenceGroup_region
|
1PASS
|
|
|
0.21243523
|
jalview.datamodel.AlignmentAnnotationTests.testLiftOverjalview.datamodel.AlignmentAnnotationTests.testLiftOver
|
1PASS
|
|
|
0.20984456
|
jalview.io.JalviewExportPropertiesTests.testImportExportPeriodGapsjalview.io.JalviewExportPropertiesTests.testImportExportPeriodGaps
|
1PASS
|
|
|
0.21070811
|
jalview.commands.TrimRegionCommandTest.testTrimLeft_withUndoAndRedojalview.commands.TrimRegionCommandTest.testTrimLeft_withUndoAndRedo
|
1PASS
|
|
|
0.20725389
|
jalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.fullWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.20725389
|
jalview.io.StockholmFileTest.secondaryStructureForRNASequencejalview.io.StockholmFileTest.secondaryStructureForRNASequence
|
1PASS
|
|
|
0.20811744
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_columnsjalview.util.MappingUtilsTest.testMapSequenceGroup_columns
|
1PASS
|
|
|
0.20725389
|
jalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequencejalview.io.StockholmFileTest.curlyWUSSsecondaryStructureForRNASequence
|
1PASS
|
|
|
0.20811744
|
jalview.gui.AlignFrameTest.testHideFeatureColumnsjalview.gui.AlignFrameTest.testHideFeatureColumns
|
1PASS
|
|
|
0.20811744
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_noSelectionGroup
|
1PASS
|
|
|
0.20379965
|
jalview.commands.EditCommandTest.testAppendEdit_deleteGapjalview.commands.EditCommandTest.testAppendEdit_deleteGap
|
1PASS
|
|
|
0.20466322
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignmentjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment
|
1PASS
|
|
|
0.20120898
|
jalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroupjalview.gui.PairwiseAlignmentPanelTest.testConstructor_withSelectionGroup
|
1PASS
|
|
|
0.20207255
|
jalview.util.MappingUtilsTest.testMapSequenceGroup_sequencesjalview.util.MappingUtilsTest.testMapSequenceGroup_sequences
|
1PASS
|
|
|
0.20207255
|
jalview.analysis.DnaTest.testTranslateCdna_hiddenColumnsjalview.analysis.DnaTest.testTranslateCdna_hiddenColumns
|
1PASS
|
|
|
0.20207255
|
jalview.commands.EditCommandTest.testLeftRight_Justify_and_preserves_gapsjalview.commands.EditCommandTest.testLeftRight_Justify_and_preserves_gaps
|
1PASS
|
|
|
0.20034543
|
jalview.datamodel.AlignmentAnnotationTests.testAdjustForAlignmentjalview.datamodel.AlignmentAnnotationTests.testAdjustForAlignment
|
1PASS
|
|
|
0.19861831
|
jalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeightjalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeight
|
1PASS
|
|
|
0.19775476
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModeljalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel
|
1PASS
|
|
|
0.19775476
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumnjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_hiddenFirstColumn
|
1PASS
|
|
|
0.19516407
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumnsjalview.analysis.scoremodels.FeatureDistanceModelTest.testFeatureScoreModel_HiddenColumns
|
1PASS
|
|
|
0.19602764
|
jalview.commands.TrimRegionCommandTest.testTrimRight_oneColumnjalview.commands.TrimRegionCommandTest.testTrimRight_oneColumn
|
1PASS
|
|
|
0.19516407
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances_withParamsjalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances_withParams
|
1PASS
|
|
|
0.19516407
|
jalview.datamodel.SequenceTest.testLocateVisibleStartofSequencejalview.datamodel.SequenceTest.testLocateVisibleStartofSequence
|
1PASS
|
|
|
0.19343697
|
jalview.datamodel.SequenceTest.testDeleteCharsjalview.datamodel.SequenceTest.testDeleteChars
|
1PASS
|
|
|
0.19430052
|
jalview.analysis.DnaTest.testTranslateCdna_simplejalview.analysis.DnaTest.testTranslateCdna_simple
|
1PASS
|
|
|
0.18480138
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeaturejalview.analysis.scoremodels.FeatureDistanceModelTest.testFindFeatureAt_PointFeature
|
1PASS
|
|
|
0.18307427
|
jalview.analysis.scoremodels.SecondaryStructureDistanceModelTest.testFindDistances_withSSUndefinedInBothSeqsjalview.analysis.scoremodels.SecondaryStructureDistanceModelTest.testFindDistances_withSSUndefinedInBothSeqs
|
1PASS
|
|
|
0.18393782
|
jalview.commands.TrimRegionCommandTest.testTrimLeft_oneColumnjalview.commands.TrimRegionCommandTest.testTrimLeft_oneColumn
|
1PASS
|
|
|
0.18480138
|
jalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistancesjalview.analysis.scoremodels.FeatureDistanceModelTest.testFindDistances
|
1PASS
|
|
|
0.18480138
|
jalview.datamodel.SeqCigarTest.testSomethingjalview.datamodel.SeqCigarTest.testSomething
|
1PASS
|
|
|
0.18566494
|
jalview.io.StockholmFileTest.pfamFileDataExtractionjalview.io.StockholmFileTest.pfamFileDataExtraction
|
1PASS
|
|
|
0.18393782
|
jalview.ext.jmol.JmolParserTest.testFileParserjalview.ext.jmol.JmolParserTest.testFileParser
|
1PASS
|
|
|
0.18221071
|
jalview.datamodel.AlignmentViewTest.testGetVisibleContigsjalview.datamodel.AlignmentViewTest.testGetVisibleContigs
|
1PASS
|
|
|
0.1804836
|
jalview.analysis.FinderTest.testFind_featuresOnlyjalview.analysis.FinderTest.testFind_featuresOnly
|
1PASS
|
|
|
0.17789292
|
jalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappingsjalview.structures.models.AAStructureBindingModelTest.testImportPDBPreservesChainMappings
|
1PASS
|
|
|
0.1761658
|
jalview.commands.EditCommandTest.testReplacejalview.commands.EditCommandTest.testReplace
|
1PASS
|
|
|
0.17443869
|
mc_view.PDBfileTest.testParse_withAnnotations_noSSmc_view.PDBfileTest.testParse_withAnnotations_noSS
|
1PASS
|
|
|
0.17443869
|
jalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePositionjalview.gui.SeqPanelTest.testSetStatusReturnsNearestResiduePosition
|
1PASS
|
|
|
0.17098446
|
jalview.renderer.ContactGeometryTest.testContactGeometryjalview.renderer.ContactGeometryTest.testContactGeometry
|
1PASS
|
|
|
0.16839378
|
jalview.datamodel.SequenceTest.testGetSubsequencejalview.datamodel.SequenceTest.testGetSubsequence
|
1PASS
|
|
|
0.16925734
|
jalview.structures.models.AAStructureBindingModelTest.testBuildColoursMapjalview.structures.models.AAStructureBindingModelTest.testBuildColoursMap
|
1PASS
|
|
|
0.1658031
|
jalview.datamodel.AlignmentViewTest.testGetVisibleAlignmentGapCharjalview.datamodel.AlignmentViewTest.testGetVisibleAlignmentGapChar
|
1PASS
|
|
|
0.16666667
|
jalview.renderer.ContactGeometryTest.testCoverageofRangejalview.renderer.ContactGeometryTest.testCoverageofRange
|
1PASS
|
|
|
0.16666667
|
jalview.datamodel.SearchResultsTest.testGetSequencesjalview.datamodel.SearchResultsTest.testGetSequences
|
1PASS
|
|
|
0.16321243
|
jalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumnsjalview.ext.jmol.JmolCommandsTest.testGetColourBySequenceCommands_hiddenColumns
|
1PASS
|
|
|
0.16148531
|
jalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlightjalview.controller.AlignViewControllerTest.testSelectColumnsWithHighlight
|
1PASS
|
|
|
0.16234888
|
jalview.datamodel.SeqCigarTest.testFindPositionjalview.datamodel.SeqCigarTest.testFindPosition
|
1PASS
|
|
|
0.15975821
|
jalview.analysis.CrossRefTest.testFindXrefSequences_fromDbRefMapjalview.analysis.CrossRefTest.testFindXrefSequences_fromDbRefMap
|
1PASS
|
|
|
0.15803109
|
jalview.datamodel.SequenceTest.testCopyConstructor_withDatasetjalview.datamodel.SequenceTest.testCopyConstructor_withDataset
|
1PASS
|
|
|
0.15025906
|
jalview.ws.dbsources.UniprotTest.testGetUniprotSequencejalview.ws.dbsources.UniprotTest.testGetUniprotSequence
|
1PASS
|
|
|
0.15112263
|
jalview.datamodel.SequenceTest.testFindPositionsjalview.datamodel.SequenceTest.testFindPositions
|
1PASS
|
|
|
0.14680484
|
mc_view.PDBChainTest.testMakeResidueList_withTempFactormc_view.PDBChainTest.testMakeResidueList_withTempFactor
|
1PASS
|
|
|
0.14766839
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_multipleProteinsjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_multipleProteins
|
1PASS
|
|
|
0.14594127
|
jalview.datamodel.AlignmentTest.testAssertDatasetIsNormalisedjalview.datamodel.AlignmentTest.testAssertDatasetIsNormalised
|
1PASS
|
|
|
0.14680484
|
jalview.io.RNAMLfileTest.testRnamlSeqImportjalview.io.RNAMLfileTest.testRnamlSeqImport
|
1PASS
|
|
|
0.14421417
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsqjalview.io.vcf.VCFLoaderTest.testDoLoad_vepCsq
|
1PASS
|
|
|
0.14421417
|
jalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrandjalview.io.vcf.VCFLoaderTest.testDoLoad_reverseStrand
|
1PASS
|
|
|
0.14421417
|
jalview.io.vcf.VCFLoaderTest.testDoLoadjalview.io.vcf.VCFLoaderTest.testDoLoad
|
1PASS
|
|
|
0.14248705
|
jalview.datamodel.AlignmentTest.testPadGapsjalview.datamodel.AlignmentTest.testPadGaps
|
1PASS
|
|
|
0.13989638
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_filterProductsjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_filterProducts
|
1PASS
|
|
|
0.14075993
|
jalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_alternativeTranscriptsjalview.analysis.AlignmentUtilsTests.testMakeCdsAlignment_alternativeTranscripts
|
1PASS
|
|
|
0.14162348
|
jalview.datamodel.AlignmentTest.testAddSequencePreserveDatasetIntegrityjalview.datamodel.AlignmentTest.testAddSequencePreserveDatasetIntegrity
|
1PASS
|
|
|
0.13903281
|
jalview.datamodel.SequenceTest.testCopyConstructor_noDatasetjalview.datamodel.SequenceTest.testCopyConstructor_noDataset
|
1PASS
|
|
|
0.1373057
|
jalview.datamodel.SequenceTest.testFindPositionjalview.datamodel.SequenceTest.testFindPosition
|
1PASS
|
|
|
0.13816926
|
jalview.analysis.AlignmentUtilsTests.testAlignAs_alternateTranscriptsUngappedjalview.analysis.AlignmentUtilsTests.testAlignAs_alternateTranscriptsUngapped
|
1PASS
|
|
|
0.13644214
|
jalview.datamodel.SequenceTest.testInsertGapsAndGapmapsjalview.datamodel.SequenceTest.testInsertGapsAndGapmaps
|
1PASS
|
|
|
0.1373057
|
jalview.datamodel.CigarArrayTest.testConstructorjalview.datamodel.CigarArrayTest.testConstructor
|
1PASS
|
|
|
0.13212435
|
jalview.datamodel.AlignmentTest.testCopyConstructorjalview.datamodel.AlignmentTest.testCopyConstructor
|
1PASS
|
|
|
0.13298792
|
jalview.io.FeaturesFileTest.readGff3Filejalview.io.FeaturesFileTest.readGff3File
|
1PASS
|
|
|
0.13298792
|
jalview.datamodel.SequenceTest.testGetPrimaryDBRefs_peptidejalview.datamodel.SequenceTest.testGetPrimaryDBRefs_peptide
|
1PASS
|
|
|
0.13039723
|
jalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessagejalview.gui.SeqPanelTest.testAmbiguousAminoAcidGetsStatusMessage
|
1PASS
|
|
|
0.126943
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.126943
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.12348878
|
jalview.io.BackupFilesTest.noBackupsEnabledTestjalview.io.BackupFilesTest.noBackupsEnabledTest
|
1PASS
|
|
|
0.12435233
|
jalview.io.FeaturesFileTest.simpleGff3FileClassjalview.io.FeaturesFileTest.simpleGff3FileClass
|
1PASS
|
|
|
0.12435233
|
jalview.datamodel.AlignmentTest.testAlignAs_dnaAsDnajalview.datamodel.AlignmentTest.testAlignAs_dnaAsDna
|
1PASS
|
|
|
0.12176166
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scales_longSequencejalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scales_longSequence
|
1PASS
|
|
|
0.12262522
|
jalview.io.gff.GffTests.testResolveExonerateGffjalview.io.gff.GffTests.testResolveExonerateGff
|
1PASS
|
|
|
0.12348878
|
jalview.io.BackupFilesTest.backupsEnabledReverseRollMaxTestjalview.io.BackupFilesTest.backupsEnabledReverseRollMaxTest
|
1PASS
|
|
|
0.12348878
|
jalview.io.BackupFilesTest.backupsEnabledSingleFileBackupTestjalview.io.BackupFilesTest.backupsEnabledSingleFileBackupTest
|
1PASS
|
|
|
0.12348878
|
jalview.analysis.AlignmentUtilsTests.testAddMappedPositions_withStopCodonjalview.analysis.AlignmentUtilsTests.testAddMappedPositions_withStopCodon
|
1PASS
|
|
|
0.12348878
|
jalview.io.BackupFilesTest.backupsEnabledNoRollMaxTestjalview.io.BackupFilesTest.backupsEnabledNoRollMaxTest
|
1PASS
|
|
|
0.12348878
|
jalview.io.BackupFilesTest.backupsEnabledRollMaxTestjalview.io.BackupFilesTest.backupsEnabledRollMaxTest
|
1PASS
|
|
|
0.12435233
|
jalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatchingjalview.io.FeaturesFileTest.simpleGff3RelaxedIdMatching
|
1PASS
|
|
|
0.12348878
|
jalview.analysis.AlignmentUtilsTests.testAddMappedPositionsjalview.analysis.AlignmentUtilsTests.testAddMappedPositions
|
1PASS
|
|
|
0.12176166
|
jalview.datamodel.AlignmentAnnotationTests.testCopyConstructorjalview.datamodel.AlignmentAnnotationTests.testCopyConstructor
|
1PASS
|
|
|
0.120034546
|
jalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFiltersjalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFilters
|
1PASS
|
|
|
0.11744387
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverColourThresholdsjalview.project.Jalview2xmlTests.testStoreAndRecoverColourThresholds
|
1PASS
|
|
|
0.114853196
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.114853196
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.114853196
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.114853196
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.115716755
|
jalview.datamodel.SequenceTest.testFindIndex_withCursorjalview.datamodel.SequenceTest.testFindIndex_withCursor
|
1PASS
|
|
|
0.11312608
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverOverviewjalview.project.Jalview2xmlTests.testStoreAndRecoverOverview
|
1PASS
|
|
|
0.11312608
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqsjalview.project.Jalview2xmlTests.testStoreAndRecoverGroupRepSeqs
|
1PASS
|
|
|
0.112262525
|
jalview.io.EmblFlatFileTest.testParsejalview.io.EmblFlatFileTest.testParse
|
1PASS
|
|
|
0.11312608
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.11312608
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.110535406
|
jalview.gui.AlignViewportTest.testDeregisterMapping_onCloseViewjalview.gui.AlignViewportTest.testDeregisterMapping_onCloseView
|
1PASS
|
|
|
0.111398965
|
jalview.gui.AlignmentPanelTest.testSetOverviewTitle_automaticOverviewjalview.gui.AlignmentPanelTest.testSetOverviewTitle_automaticOverview
|
1PASS
|
|
|
0.111398965
|
jalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProteinjalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein
|
1PASS
|
|
|
0.10880829
|
jalview.io.GenBankFileTest.testParsejalview.io.GenBankFileTest.testParse
|
1PASS
|
|
|
0.10880829
|
jalview.renderer.ScaleRendererTest.testCalculateMarksjalview.renderer.ScaleRendererTest.testCalculateMarks
|
1PASS
|
|
|
0.109671846
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.10880829
|
jalview.project.Jalview2xmlTests.testMergeDatasetsforManyViewsjalview.project.Jalview2xmlTests.testMergeDatasetsforManyViews
|
1PASS
|
|
|
0.109671846
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplayjalview.renderer.seqfeatures.FeatureRendererTest.testFilterFeaturesForDisplay
|
1PASS
|
|
|
0.110535406
|
jalview.gui.QuitHandlerTest.testSavedAlignmentChangesjalview.gui.QuitHandlerTest.testSavedAlignmentChanges
|
1PASS
|
|
|
0.109671846
|
jalview.io.EmblFlatFileTest.testParse_noUniprotXrefjalview.io.EmblFlatFileTest.testParse_noUniprotXref
|
1PASS
|
|
|
0.110535406
|
jalview.analysis.SeqsetUtilsTest.testSeqFeatureAdditionjalview.analysis.SeqsetUtilsTest.testSeqFeatureAddition
|
1PASS
|
|
|
0.109671846
|
jalview.project.Jalview2xmlTests.testStoreAndRecoverNoOverviewjalview.project.Jalview2xmlTests.testStoreAndRecoverNoOverview
|
1PASS
|
|
|
0.107081175
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureAtEndjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureAtEnd
|
1PASS
|
|
|
0.107081175
|
jalview.io.EmblFlatFileTest.testParseToRNAjalview.io.EmblFlatFileTest.testParseToRNA
|
1PASS
|
|
|
0.107944734
|
jalview.datamodel.SequenceTest.testDeriveSequence_noDatasetGappedjalview.datamodel.SequenceTest.testDeriveSequence_noDatasetGapped
|
1PASS
|
|
|
0.106217615
|
jalview.io.WindowsFileLoadAndSaveTest.loadAndSaveAlignmentjalview.io.WindowsFileLoadAndSaveTest.loadAndSaveAlignment
|
1PASS
|
|
|
0.107081175
|
jalview.datamodel.SequenceTest.testFindPosition_withCursorjalview.datamodel.SequenceTest.testFindPosition_withCursor
|
1PASS
|
|
|
0.103626944
|
jalview.gui.QuitHandlerTest.testSavedProjectChangesjalview.gui.QuitHandlerTest.testSavedProjectChanges
|
1PASS
|
|
|
0.102763385
|
jalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignmentjalview.io.gff.ExonerateHelperTest.testAddExonerateGffToAlignment
|
1PASS
|
|
|
0.103626944
|
jalview.gui.QuitHandlerTest.testWaitForSaveQuitjalview.gui.QuitHandlerTest.testWaitForSaveQuit
|
1PASS
|
|
|
0.102763385
|
jalview.io.FeaturesFileTest.testPrintGffFormatjalview.io.FeaturesFileTest.testPrintGffFormat
|
1PASS
|
|
|
0.103626944
|
jalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjectsjalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjects
|
1PASS
|
|
|
0.1044905
|
jalview.gui.FeatureSettingsTest.testSaveLoadjalview.gui.FeatureSettingsTest.testSaveLoad
|
1PASS
|
|
|
0.1044905
|
jalview.renderer.seqfeatures.FeatureRendererTest.testIsVisiblejalview.renderer.seqfeatures.FeatureRendererTest.testIsVisible
|
1PASS
|
|
|
0.1044905
|
jalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeaturesjalview.renderer.seqfeatures.FeatureRendererTest.testFindAllFeatures
|
1PASS
|
|
|
0.102763385
|
jalview.project.Jalview2xmlTests.testMergeDatasetsforViewsjalview.project.Jalview2xmlTests.testMergeDatasetsforViews
|
1PASS
|
|
|
0.102763385
|
jalview.io.FeaturesFileTest.testPrintGffFormat_withFiltersjalview.io.FeaturesFileTest.testPrintGffFormat_withFilters
|
1PASS
|
|
|
0.102763385
|
jalview.commands.EditCommandTest.testReplaceFirstResiduesWithGapsjalview.commands.EditCommandTest.testReplaceFirstResiduesWithGaps
|
1PASS
|
|
|
0.103626944
|
jalview.analysis.FinderTest.testFind_ignoreHiddenColumnsjalview.analysis.FinderTest.testFind_ignoreHiddenColumns
|
1PASS
|
|
|
0.10103627
|
jalview.io.FeaturesFileTest.testParse_jalviewFeaturesOnlyjalview.io.FeaturesFileTest.testParse_jalviewFeaturesOnly
|
1PASS
|
|
|
0.101899825
|
jalview.io.StockholmFileTest.dbrefOutputjalview.io.StockholmFileTest.dbrefOutput
|
1PASS
|
|
|
0.102763385
|
jalview.io.FeaturesFileTest.testPrintJalviewFormatjalview.io.FeaturesFileTest.testPrintJalviewFormat
|
1PASS
|
|
|
0.102763385
|
jalview.io.FeaturesFileTest.testPrintJalviewFormat_withFiltersjalview.io.FeaturesFileTest.testPrintJalviewFormat_withFilters
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10103627
|
jalview.io.FeaturesFileTest.testParse_pureGff3jalview.io.FeaturesFileTest.testParse_pureGff3
|
1PASS
|
|
|
0.10103627
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.099309154
|
jalview.gui.PopupMenuTest.testHideInsertionsjalview.gui.PopupMenuTest.testHideInsertions
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.099309154
|
jalview.io.AnnotationFileIOTest.testAnnotateAlignmentViewjalview.io.AnnotationFileIOTest.testAnnotateAlignmentView
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10103627
|
jalview.io.FeaturesFileTest.testParse_mixedJalviewGffjalview.io.FeaturesFileTest.testParse_mixedJalviewGff
|
1PASS
|
|
|
0.10017271
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.10103627
|
jalview.io.FeaturesFileTest.testParsejalview.io.FeaturesFileTest.testParse
|
1PASS
|
|
|
0.099309154
|
jalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein_singleSequencejalview.datamodel.AlignmentTest.testAlignAs_cdnaAsProtein_singleSequence
|
1PASS
|
|
|
0.09585492
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_nucleotidejalview.gui.ColourMenuHelperTest.testAddMenuItems_nucleotide
|
1PASS
|
|
|
0.09671848
|
jalview.structures.models.AAStructureBindingModelTest.testFindSuperposableResidues_hiddenColumnjalview.structures.models.AAStructureBindingModelTest.testFindSuperposableResidues_hiddenColumn
|
1PASS
|
|
|
0.09671848
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.09671848
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.09671848
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.097582035
|
jalview.analysis.AlignmentUtilsTests.testShowOrHideSequenceAnnotationsjalview.analysis.AlignmentUtilsTests.testShowOrHideSequenceAnnotations
|
1PASS
|
|
|
0.098445594
|
jalview.analysis.FinderTest.testFind_withHiddenColumnsAndSelectionjalview.analysis.FinderTest.testFind_withHiddenColumnsAndSelection
|
1PASS
|
|
|
0.097582035
|
jalview.util.MappingUtilsTest.testMapColumnSelection_nulljalview.util.MappingUtilsTest.testMapColumnSelection_null
|
1PASS
|
|
|
0.09671848
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.09671848
|
jalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTestjalview.bin.CommandsTest.argFilesGlobAndSubstitutionsTest
|
1PASS
|
|
|
0.097582035
|
jalview.datamodel.AlignmentTest.testCreateDatasetAlignmentjalview.datamodel.AlignmentTest.testCreateDatasetAlignment
|
1PASS
|
|
|
0.097582035
|
jalview.datamodel.AlignmentTest.testAlignAs_proteinAsCdnajalview.datamodel.AlignmentTest.testAlignAs_proteinAsCdna
|
1PASS
|
|
|
0.09671848
|
jalview.structures.models.AAStructureBindingModelTest.testFindSuperposableResiduesjalview.structures.models.AAStructureBindingModelTest.testFindSuperposableResidues
|
1PASS
|
|
|
0.09585492
|
jalview.bin.CommandsTest.allLinkedIdsTestjalview.bin.CommandsTest.allLinkedIdsTest
|
1PASS
|
|
|
0.09671848
|
jalview.gui.QuitHandlerTest.testUnsavedChangesjalview.gui.QuitHandlerTest.testUnsavedChanges
|
1PASS
|
|
|
0.09671848
|
jalview.analysis.FinderTest.testFindAll_sequenceIdsjalview.analysis.FinderTest.testFindAll_sequenceIds
|
1PASS
|
|
|
0.09671848
|
jalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.PIDColourSchemeTest.testFindColour_ignoreGaps
|
1PASS
|
|
|
0.09671848
|
jalview.gui.QuitHandlerTest.testNoGUIUnsavedChangesjalview.gui.QuitHandlerTest.testNoGUIUnsavedChanges
|
1PASS
|
|
|
0.094127804
|
jalview.viewmodel.ViewportRangesTest.testScrollToWrappedVisiblejalview.viewmodel.ViewportRangesTest.testScrollToWrappedVisible
|
1PASS
|
|
|
0.094127804
|
jalview.datamodel.ColumnSelectionTest.testInvertColumnSelectionjalview.datamodel.ColumnSelectionTest.testInvertColumnSelection
|
1PASS
|
|
|
0.09499136
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_noAnnotations
|
1PASS
|
|
|
0.094127804
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withXrefsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withXrefs
|
1PASS
|
|
|
0.09499136
|
jalview.gui.AlignViewportTest.testSetSelectionGroupjalview.gui.AlignViewportTest.testSetSelectionGroup
|
1PASS
|
|
|
0.09585492
|
jalview.analysis.DnaTest.testReverseCdnajalview.analysis.DnaTest.testReverseCdna
|
1PASS
|
|
|
0.09671848
|
jalview.gui.QuitHandlerTest.testForceQuitjalview.gui.QuitHandlerTest.testForceQuit
|
1PASS
|
|
|
0.09671848
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.09671848
|
jalview.bin.CommandsTest.commandsOpenTestjalview.bin.CommandsTest.commandsOpenTest
|
1PASS
|
|
|
0.09671848
|
jalview.gui.QuitHandlerTest.testInstantQuitjalview.gui.QuitHandlerTest.testInstantQuit
|
1PASS
|
|
|
0.09499136
|
jalview.gui.AlignViewportTest.testSetGetHasSearchResultsjalview.gui.AlignViewportTest.testSetGetHasSearchResults
|
1PASS
|
|
|
0.09499136
|
jalview.analysis.TestAlignSeq.testGetMappingForS1_withLowerCasejalview.analysis.TestAlignSeq.testGetMappingForS1_withLowerCase
|
1PASS
|
|
|
0.09499136
|
jalview.analysis.FinderTest.testFind_inDescriptionjalview.analysis.FinderTest.testFind_inDescription
|
1PASS
|
|
|
0.09499136
|
jalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGapsjalview.schemes.ClustalxColourSchemeTest.testFindColour_ignoreGaps
|
1PASS
|
|
|
0.09326425
|
jalview.viewmodel.ViewportRangesTest.testSetViewportLocationjalview.viewmodel.ViewportRangesTest.testSetViewportLocation
|
1PASS
|
|
|
0.094127804
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withReference
|
1PASS
|
|
|
0.094127804
|
jalview.viewmodel.ViewportRangesTest.testGetWrappedMaxScrolljalview.viewmodel.ViewportRangesTest.testGetWrappedMaxScroll
|
1PASS
|
|
|
0.094127804
|
jalview.datamodel.ColumnSelectionTest.testHideSelectedColumnsjalview.datamodel.ColumnSelectionTest.testHideSelectedColumns
|
1PASS
|
|
|
0.09499136
|
jalview.schemes.ColourSchemesTest.testRegisterColourSchemejalview.schemes.ColourSchemesTest.testRegisterColourScheme
|
1PASS
|
|
|
0.09499136
|
jalview.gui.AlignViewportTest.testGetConsensusSeqjalview.gui.AlignViewportTest.testGetConsensusSeq
|
1PASS
|
|
|
0.094127804
|
jalview.datamodel.AlignmentTest.testVerifyAlignmentDatasetRefsjalview.datamodel.AlignmentTest.testVerifyAlignmentDatasetRefs
|
1PASS
|
|
|
0.09499136
|
jalview.gui.SeqPanelTest.testFindColumn_unwrappedjalview.gui.SeqPanelTest.testFindColumn_unwrapped
|
1PASS
|
|
|
0.09499136
|
jalview.gui.AlignViewportTest.testSetGlobalColourSchemejalview.gui.AlignViewportTest.testSetGlobalColourScheme
|
1PASS
|
|
|
0.094127804
|
jalview.datamodel.ColumnSelectionTest.testHideColumns_withSelectionjalview.datamodel.ColumnSelectionTest.testHideColumns_withSelection
|
1PASS
|
|
|
0.094127804
|
jalview.gui.ScalePanelTest.testBuildPopupMenujalview.gui.ScalePanelTest.testBuildPopupMenu
|
1PASS
|
|
|
0.094127804
|
jalview.datamodel.HiddenColumnsTest.testHideColumnsjalview.datamodel.HiddenColumnsTest.testHideColumns
|
1PASS
|
|
|
0.09499136
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scaleAbovejalview.gui.SeqPanelTest.testFindMousePosition_wrapped_scaleAbove
|
1PASS
|
|
|
0.09499136
|
jalview.gui.AlignViewportTest.testUpdateConservation_qualityOnlyjalview.gui.AlignViewportTest.testUpdateConservation_qualityOnly
|
1PASS
|
|
|
0.094127804
|
jalview.io.AnnotationExporterTest.testAnnotationExportAsCSVjalview.io.AnnotationExporterTest.testAnnotationExportAsCSV
|
1PASS
|
|
|
0.09499136
|
jalview.viewmodel.ViewportRangesTest.testPageUpDownWrappedjalview.viewmodel.ViewportRangesTest.testPageUpDownWrapped
|
1PASS
|
|
|
0.09240069
|
jalview.ws.dbsources.EBIAlphaFoldTest.checkImportPAEToStructurejalview.ws.dbsources.EBIAlphaFoldTest.checkImportPAEToStructure
|
1PASS
|
|
|
0.09240069
|
jalview.ws.dbsources.EBIAlphaFoldTest.checkImportPAEToStructurejalview.ws.dbsources.EBIAlphaFoldTest.checkImportPAEToStructure
|
1PASS
|
|
|
0.09326425
|
jalview.datamodel.AlignmentTest.testDeleteHiddenSequencejalview.datamodel.AlignmentTest.testDeleteHiddenSequence
|
1PASS
|
|
|
0.09240069
|
jalview.gui.AlignFrameTest.testNewView_colourThresholdsjalview.gui.AlignFrameTest.testNewView_colourThresholds
|
1PASS
|
|
|
0.09326425
|
jalview.datamodel.AlignmentTest.testDeleteSequenceBySeqjalview.datamodel.AlignmentTest.testDeleteSequenceBySeq
|
1PASS
|
|
|
0.094127804
|
jalview.schemes.ColourSchemesTest.testGetColourSchemejalview.schemes.ColourSchemesTest.testGetColourScheme
|
1PASS
|
|
|
0.094127804
|
jalview.gui.AlignViewportTest.testDeregisterMapping_withNoReferencejalview.gui.AlignViewportTest.testDeregisterMapping_withNoReference
|
1PASS
|
|
|
0.094127804
|
jalview.gui.ScalePanelTest.testSelectColumns_withHiddenjalview.gui.ScalePanelTest.testSelectColumns_withHidden
|
1PASS
|
|
|
0.094127804
|
jalview.renderer.seqfeatures.FeatureRendererTest.testGetColourjalview.renderer.seqfeatures.FeatureRendererTest.testGetColour
|
1PASS
|
|
|
0.09499136
|
jalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotationsjalview.gui.SeqPanelTest.testFindMousePosition_wrapped_annotations
|
1PASS
|
|
|
0.094127804
|
jalview.schemes.ClustalxColourSchemeTest.testFindColourjalview.schemes.ClustalxColourSchemeTest.testFindColour
|
1PASS
|
|
|
0.09499136
|
jalview.datamodel.AlignmentTest.testCreateDataset_updateDbrefMappingsjalview.datamodel.AlignmentTest.testCreateDataset_updateDbrefMappings
|
1PASS
|
|
|
0.09499136
|
jalview.datamodel.SequenceTest.testGetPrimaryDBRefs_nucleotidejalview.datamodel.SequenceTest.testGetPrimaryDBRefs_nucleotide
|
1PASS
|
|
|
0.09499136
|
jalview.viewmodel.ViewportRangesTest.testGetWrappedScrollPositionjalview.viewmodel.ViewportRangesTest.testGetWrappedScrollPosition
|
1PASS
|
|
|
0.09499136
|
jalview.gui.SeqPanelTest.testFindColumn_and_FindAlignmentColumn_wrappedjalview.gui.SeqPanelTest.testFindColumn_and_FindAlignmentColumn_wrapped
|
1PASS
|
|
|
0.09499136
|
jalview.gui.AlignViewportTest.testShowOrDontShowOccupancyjalview.gui.AlignViewportTest.testShowOrDontShowOccupancy
|
1PASS
|
|
|
0.09240069
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_targetgffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_targetgff
|
1PASS
|
|
|
0.09240069
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_targetgffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_targetgff
|
1PASS
|
|
|
0.09240069
|
jalview.ws.dbsources.EBIAlphaFoldTest.checkImportPAEToStructurejalview.ws.dbsources.EBIAlphaFoldTest.checkImportPAEToStructure
|
1PASS
|
|
|
0.09326425
|
jalview.datamodel.AlignmentTest.testDeleteSequenceByIndexjalview.datamodel.AlignmentTest.testDeleteSequenceByIndex
|
1PASS
|
|
|
0.09326425
|
jalview.viewmodel.ViewportRangesTest.testScrollUp_wrappedjalview.viewmodel.ViewportRangesTest.testScrollUp_wrapped
|
1PASS
|
|
|
0.09067357
|
jalview.datamodel.AlignmentTest.testCreateDatasetAlignmentWithMappedToSeqsjalview.datamodel.AlignmentTest.testCreateDatasetAlignmentWithMappedToSeqs
|
1PASS
|
|
|
0.09067357
|
jalview.gui.ScalePanelTest.testPreventNegativeStartColumnjalview.gui.ScalePanelTest.testPreventNegativeStartColumn
|
1PASS
|
|
|
0.09067357
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_forAlignFramejalview.gui.ColourMenuHelperTest.testAddMenuItems_forAlignFrame
|
1PASS
|
|
|
0.09067357
|
jalview.gui.PaintRefresherTest.testGetAssociatedPanelsjalview.gui.PaintRefresherTest.testGetAssociatedPanels
|
1PASS
|
|
|
0.09067357
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_prioritiseXrefsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_prioritiseXrefs
|
1PASS
|
|
|
0.08894646
|
jalview.datamodel.SearchResultsTest.testMarkColumnsjalview.datamodel.SearchResultsTest.testMarkColumns
|
1PASS
|
|
|
0.08721934
|
jalview.datamodel.SequenceDummyTest.testBecomejalview.datamodel.SequenceDummyTest.testBecome
|
1PASS
|
|
|
0.08635578
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_transparencySingleFeaturejalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_transparencySingleFeature
|
1PASS
|
|
|
0.08376511
|
jalview.datamodel.SequenceTest.testGetSequenceFeaturesjalview.datamodel.SequenceTest.testGetSequenceFeatures
|
1PASS
|
|
|
0.08462867
|
jalview.gui.AlignmentPanelTest.testSetOverviewTitlejalview.gui.AlignmentPanelTest.testSetOverviewTitle
|
1PASS
|
|
|
0.08376511
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withStartAndStopCodonsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_withStartAndStopCodons
|
1PASS
|
|
|
0.08376511
|
jalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_noXrefsjalview.analysis.AlignmentUtilsTests.testMapProteinAlignmentToCdna_noXrefs
|
1PASS
|
|
|
0.08462867
|
jalview.datamodel.SequenceTest.testTransferAnnotationjalview.datamodel.SequenceTest.testTransferAnnotation
|
1PASS
|
|
|
0.08462867
|
jalview.gui.AlignFrameTest.testNewView_dsRefPreservedjalview.gui.AlignFrameTest.testNewView_dsRefPreserved
|
1PASS
|
|
|
0.08290155
|
jalview.datamodel.AlignedCodonIteratorTest.testNext_withOffsetjalview.datamodel.AlignedCodonIteratorTest.testNext_withOffset
|
1PASS
|
|
|
0.082038
|
jalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodonjalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodon
|
1PASS
|
|
|
0.082038
|
jalview.analysis.AlignmentUtilsTests.testAlignProteinAsDnajalview.analysis.AlignmentUtilsTests.testAlignProteinAsDna
|
1PASS
|
|
|
0.08290155
|
jalview.datamodel.SequenceTest.testDeriveSequence_noDatasetUngappedjalview.datamodel.SequenceTest.testDeriveSequence_noDatasetUngapped
|
1PASS
|
|
|
0.082038
|
jalview.analysis.AlignmentUtilsTests.testGetSequencesByNamejalview.analysis.AlignmentUtilsTests.testGetSequencesByName
|
1PASS
|
|
|
0.082038
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.testUpSeqsjalview.gui.structurechooser.StructureChooserQuerySourceTest.testUpSeqs
|
1PASS
|
|
|
0.08290155
|
jalview.util.UrlLinkTest.testCreateLinksFromSequencejalview.util.UrlLinkTest.testCreateLinksFromSequence
|
1PASS
|
|
|
0.07944732
|
jalview.datamodel.SequenceGroupTest.testAddOrRemovejalview.datamodel.SequenceGroupTest.testAddOrRemove
|
1PASS
|
|
|
0.08031088
|
jalview.datamodel.SequenceTest.testFindIndexjalview.datamodel.SequenceTest.testFindIndex
|
1PASS
|
|
|
0.07944732
|
jalview.datamodel.SequenceGroupTest.testAddSequencejalview.datamodel.SequenceGroupTest.testAddSequence
|
1PASS
|
|
|
0.07944732
|
jalview.datamodel.SequenceTest.testCreateDatasetSequencejalview.datamodel.SequenceTest.testCreateDatasetSequence
|
1PASS
|
|
|
0.08031088
|
jalview.datamodel.SequenceTest.testGetSequencejalview.datamodel.SequenceTest.testGetSequence
|
1PASS
|
|
|
0.07772021
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedRegionjalview.datamodel.AlignedCodonFrameTest.testGetMappedRegion
|
1PASS
|
|
|
0.07685665
|
jalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToProteinjalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToProtein
|
1PASS
|
|
|
0.07772021
|
jalview.datamodel.AlignedCodonFrameTest.testMarkMappedRegionjalview.datamodel.AlignedCodonFrameTest.testMarkMappedRegion
|
1PASS
|
|
|
0.07772021
|
jalview.util.MappingUtilsTest.testBuildSearchResultsjalview.util.MappingUtilsTest.testBuildSearchResults
|
1PASS
|
|
|
0.07685665
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.07685665
|
jalview.datamodel.AlignmentTest.testEqualsjalview.datamodel.AlignmentTest.testEquals
|
1PASS
|
|
|
0.07772021
|
jalview.io.StockholmFileTest.stockholmFileRnaSSSpaceCharsjalview.io.StockholmFileTest.stockholmFileRnaSSSpaceChars
|
1PASS
|
|
|
0.07772021
|
jalview.datamodel.AlignedCodonFrameTest.testGetCoveringCodonMappingjalview.datamodel.AlignedCodonFrameTest.testGetCoveringCodonMapping
|
1PASS
|
|
|
0.07772021
|
jalview.util.MappingUtilsTest.testBuildSearchResults_withIntronjalview.util.MappingUtilsTest.testBuildSearchResults_withIntron
|
1PASS
|
|
|
0.07340242
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_graduatedWithThresholdjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_graduatedWithThreshold
|
1PASS
|
|
|
0.07340242
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.07426598
|
jalview.analysis.AlignmentUtilsTests.testMapCdsToProteinjalview.analysis.AlignmentUtilsTests.testMapCdsToProtein
|
1PASS
|
|
|
0.0716753
|
mc_view.PDBfileTest.testParsemc_view.PDBfileTest.testParse
|
1PASS
|
|
|
0.0716753
|
jalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_mappedProteinProteinjalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_mappedProteinProtein
|
1PASS
|
|
|
0.0716753
|
jalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_keepIntronGapsOnlyjalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_keepIntronGapsOnly
|
1PASS
|
|
|
0.07081174
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.0716753
|
jalview.datamodel.SequenceTest.testGapMapjalview.datamodel.SequenceTest.testGapMap
|
1PASS
|
|
|
0.0716753
|
jalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withTrailingPeptidejalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withTrailingPeptide
|
1PASS
|
|
|
0.07081174
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.07081174
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.0716753
|
jalview.io.PhylipFileTests.testInterleavedIOjalview.io.PhylipFileTests.testInterleavedIO
|
1PASS
|
|
|
0.0716753
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_featureGroupNotDisplayedjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_featureGroupNotDisplayed
|
1PASS
|
|
|
0.0716753
|
jalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withMapping_withIntronsjalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withMapping_withIntrons
|
1PASS
|
|
|
0.07081174
|
jalview.commands.EditCommandTest.testPriorState_singleInsertWithOffsetjalview.commands.EditCommandTest.testPriorState_singleInsertWithOffset
|
1PASS
|
|
|
0.0716753
|
jalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withMapping_noIntronsjalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withMapping_noIntrons
|
1PASS
|
|
|
0.0716753
|
jalview.io.PhylipFileTests.testSequentialIOjalview.io.PhylipFileTests.testSequentialIO
|
1PASS
|
|
|
0.07081174
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_contactFeaturejalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_contactFeature
|
1PASS
|
|
|
0.0716753
|
jalview.analysis.AlignmentUtilsTests.testFindCdsForProtein_noUTRjalview.analysis.AlignmentUtilsTests.testFindCdsForProtein_noUTR
|
1PASS
|
|
|
0.07253886
|
jalview.analysis.FinderTest.testFind_findAllInSelectionWithShortSequencejalview.analysis.FinderTest.testFind_findAllInSelectionWithShortSequence
|
1PASS
|
|
|
0.07081174
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_graduatedFeatureColourjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_graduatedFeatureColour
|
1PASS
|
|
|
0.0716753
|
jalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withMapping_withUnmappedProteinjalview.analysis.AlignmentUtilsTests.testAlignSequenceAs_withMapping_withUnmappedProtein
|
1PASS
|
|
|
0.0716753
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_multipleFeaturesAtPositionNoTransparencyjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_multipleFeaturesAtPositionNoTransparency
|
1PASS
|
|
|
0.06994819
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_singleFeatureNotAtPositionjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_singleFeatureNotAtPosition
|
1PASS
|
|
|
0.06908463
|
jalview.datamodel.AlignedCodonFrameTest.testIsRealisableWithjalview.datamodel.AlignedCodonFrameTest.testIsRealisableWith
|
1PASS
|
|
|
0.06908463
|
jalview.analysis.AlignmentUtilsTests.testFindCdsPositions_fivePrimeIncompletejalview.analysis.AlignmentUtilsTests.testFindCdsPositions_fivePrimeIncomplete
|
1PASS
|
|
|
0.06908463
|
jalview.analysis.AlignmentUtilsTests.testFindCdsPositionsjalview.analysis.AlignmentUtilsTests.testFindCdsPositions
|
1PASS
|
|
|
0.06908463
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_singleFeatureAtPositionjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_singleFeatureAtPosition
|
1PASS
|
|
|
0.06908463
|
jalview.analysis.FinderTest.testFindAll_inSelectionjalview.analysis.FinderTest.testFindAll_inSelection
|
1PASS
|
|
|
0.06908463
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_nestedFeaturesjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_nestedFeatures
|
1PASS
|
|
|
0.06908463
|
jalview.io.gff.InterProScanHelperTest.testProcessProteinMatchjalview.io.gff.InterProScanHelperTest.testProcessProteinMatch
|
1PASS
|
|
|
0.06735751
|
jalview.ws.dbsources.EmblXmlSourceTest.testGetSequencejalview.ws.dbsources.EmblXmlSourceTest.testGetSequence
|
1PASS
|
|
|
0.0656304
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.0656304
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_querygffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_reverse_querygff
|
1PASS
|
|
|
0.06649396
|
jalview.analysis.FinderTest.testFind_residueNumberjalview.analysis.FinderTest.testFind_residueNumber
|
1PASS
|
|
|
0.06649396
|
jalview.datamodel.AlignedCodonIteratorTest.testNext_unmappedPeptidejalview.datamodel.AlignedCodonIteratorTest.testNext_unmappedPeptide
|
1PASS
|
|
|
0.06649396
|
jalview.datamodel.AlignedCodonIteratorTest.testAnotherjalview.datamodel.AlignedCodonIteratorTest.testAnother
|
1PASS
|
|
|
0.06735751
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.06735751
|
jalview.datamodel.AlignedCodonFrameTest.testRealiseWithjalview.datamodel.AlignedCodonFrameTest.testRealiseWith
|
1PASS
|
|
|
0.06476684
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedCodonsjalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons
|
1PASS
|
|
|
0.0656304
|
jalview.datamodel.SequenceTest.testSetDatasetSequence_cascadingjalview.datamodel.SequenceTest.testSetDatasetSequence_cascading
|
1PASS
|
|
|
0.06476684
|
jalview.io.StockholmFileTest.stockholmFileRnaSSAlphaCharsjalview.io.StockholmFileTest.stockholmFileRnaSSAlphaChars
|
1PASS
|
|
|
0.06476684
|
jalview.datamodel.AlignmentTest.testAppendjalview.datamodel.AlignmentTest.testAppend
|
1PASS
|
|
|
0.0656304
|
jalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_querygffjalview.io.gff.ExonerateHelperTest.testProcessGffSimilarity_protein2dna_forward_querygff
|
1PASS
|
|
|
0.0656304
|
jalview.datamodel.SequenceTest.testReplacejalview.datamodel.SequenceTest.testReplace
|
1PASS
|
|
|
0.06649396
|
jalview.datamodel.AlignedCodonIteratorTest.testNext_incompleteCodonjalview.datamodel.AlignedCodonIteratorTest.testNext_incompleteCodon
|
1PASS
|
|
|
0.06649396
|
jalview.datamodel.AlignedCodonIteratorTest.testNextjalview.datamodel.AlignedCodonIteratorTest.testNext
|
1PASS
|
|
|
0.0656304
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.06649396
|
jalview.io.PfamFormatInputTest.testPfamFormatValidLimitsjalview.io.PfamFormatInputTest.testPfamFormatValidLimits
|
1PASS
|
|
|
0.06390328
|
jalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToNucleotidejalview.analysis.CrossRefTest.testFindXrefSequences_indirectDbrefToNucleotide
|
1PASS
|
|
|
0.06476684
|
jalview.gui.SeqCanvasTest.testClear_HighlightAndSelectionjalview.gui.SeqCanvasTest.testClear_HighlightAndSelection
|
1PASS
|
|
|
0.06390328
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.06476684
|
jalview.ext.jmol.JmolParserTest.testLocalPDBIdjalview.ext.jmol.JmolParserTest.testLocalPDBId
|
1PASS
|
|
|
0.06476684
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_dnaVariantsjalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_dnaVariants
|
1PASS
|
|
|
0.059585493
|
jalview.analysis.CrossRefTest.testFindXrefSequences_noDbrefsjalview.analysis.CrossRefTest.testFindXrefSequences_noDbrefs
|
1PASS
|
|
|
0.06044905
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_splicedjalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_spliced
|
1PASS
|
|
|
0.06044905
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToForwardjalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToForward
|
1PASS
|
|
|
0.06044905
|
jalview.analysis.AlignmentUtilsTests.testMapCdnaToProtein_forSubsequencejalview.analysis.AlignmentUtilsTests.testMapCdnaToProtein_forSubsequence
|
1PASS
|
|
|
0.06131261
|
jalview.datamodel.AlignedCodonFrameTest.testAddMapjalview.datamodel.AlignedCodonFrameTest.testAddMap
|
1PASS
|
|
|
0.06044905
|
jalview.util.MappingUtilsTest.testFindMappingsForSequenceAndOthersjalview.util.MappingUtilsTest.testFindMappingsForSequenceAndOthers
|
1PASS
|
|
|
0.06131261
|
jalview.datamodel.SequenceTest.testSetNamejalview.datamodel.SequenceTest.testSetName
|
1PASS
|
|
|
0.062176164
|
jalview.analysis.AlignmentUtilsTests.testFindCdsForProteinjalview.analysis.AlignmentUtilsTests.testFindCdsForProtein
|
1PASS
|
|
|
0.06131261
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_forSubSequencesjalview.datamodel.AlignedCodonFrameTest.testGetMappedCodons_forSubSequences
|
1PASS
|
|
|
0.062176164
|
jalview.analysis.CrossRefTest.testFindXrefSourcesForSequence_proteinToDnajalview.analysis.CrossRefTest.testFindXrefSourcesForSequence_proteinToDna
|
1PASS
|
|
|
0.06044905
|
jalview.ext.jmol.JmolParserTest.testParse_missingResiduesjalview.ext.jmol.JmolParserTest.testParse_missingResidues
|
1PASS
|
|
|
0.06044905
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToReversejalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_forwardToReverse
|
1PASS
|
|
|
0.06044905
|
jalview.ext.jmol.JmolParserTest.testParse_alternativeResiduesjalview.ext.jmol.JmolParserTest.testParse_alternativeResidues
|
1PASS
|
|
|
0.06044905
|
jalview.util.MappingUtilsTest.testFindMappingsForSequencejalview.util.MappingUtilsTest.testFindMappingsForSequence
|
1PASS
|
|
|
0.06131261
|
jalview.datamodel.AlignedCodonFrameTest.testFindAlignedSequencejalview.datamodel.AlignedCodonFrameTest.testFindAlignedSequence
|
1PASS
|
|
|
0.059585493
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.06044905
|
jalview.datamodel.AlignedCodonFrameTest.testGetMappedRegion_eitherWayjalview.datamodel.AlignedCodonFrameTest.testGetMappedRegion_eitherWay
|
1PASS
|
|
|
0.057858378
|
jalview.io.ClustalFileTest.testParse_withNumberingjalview.io.ClustalFileTest.testParse_withNumbering
|
1PASS
|
|
|
0.058721934
|
jalview.analysis.AlignmentUtilsTests.testTransferFeatures_withOmitjalview.analysis.AlignmentUtilsTests.testTransferFeatures_withOmit
|
1PASS
|
|
|
0.057858378
|
jalview.io.ClustalFileTest.testParse_noNumberingjalview.io.ClustalFileTest.testParse_noNumbering
|
1PASS
|
|
|
0.058721934
|
jalview.analysis.CrossRefTest.testSearchDatasetjalview.analysis.CrossRefTest.testSearchDataset
|
1PASS
|
|
|
0.058721934
|
jalview.datamodel.SearchResultsTest.testInvolvesSequencejalview.datamodel.SearchResultsTest.testInvolvesSequence
|
1PASS
|
|
|
0.058721934
|
jalview.analysis.AlignmentUtilsTests.testTransferFeaturesjalview.analysis.AlignmentUtilsTests.testTransferFeatures
|
1PASS
|
|
|
0.058721934
|
jalview.analysis.AlignmentUtilsTests.testTransferFeatures_withSelectjalview.analysis.AlignmentUtilsTests.testTransferFeatures_withSelect
|
1PASS
|
|
|
0.058721934
|
jalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_reverseToForwardjalview.io.gff.Gff3HelperTest.testProcessCdnaMatch_reverseToForward
|
1PASS
|
|
|
0.058721934
|
jalview.datamodel.AlignedCodonFrameTest.testGetCoveringMappingjalview.datamodel.AlignedCodonFrameTest.testGetCoveringMapping
|
1PASS
|
|
|
0.056131262
|
jalview.analysis.FinderTest.testFind_regexjalview.analysis.FinderTest.testFind_regex
|
1PASS
|
|
|
0.05699482
|
jalview.datamodel.SequenceTest.testGapBitsetjalview.datamodel.SequenceTest.testGapBitset
|
1PASS
|
|
|
0.05699482
|
jalview.analysis.FinderTest.testFind_withHiddenColumnsjalview.analysis.FinderTest.testFind_withHiddenColumns
|
1PASS
|
|
|
0.056131262
|
jalview.datamodel.AlignedCodonFrameTest.testCouldReplaceSequencejalview.datamodel.AlignedCodonFrameTest.testCouldReplaceSequence
|
1PASS
|
|
|
0.05699482
|
jalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReportjalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReport
|
1PASS
|
|
|
0.05699482
|
jalview.io.StockholmFileTest.descriptionLineOutputjalview.io.StockholmFileTest.descriptionLineOutput
|
1PASS
|
|
|
0.056131262
|
jalview.gui.AlignFrameTest.testChangeColour_background_groupsAndThresholdsjalview.gui.AlignFrameTest.testChangeColour_background_groupsAndThresholds
|
1PASS
|
|
|
0.05699482
|
jalview.io.FormatAdapterTest.testRoundTripjalview.io.FormatAdapterTest.testRoundTrip
|
1PASS
|
|
|
0.054404143
|
jalview.ws.dbsources.UniprotTest.testimportOfProblemEntriesjalview.ws.dbsources.UniprotTest.testimportOfProblemEntries
|
1PASS
|
|
|
0.054404143
|
jalview.analysis.AlignmentUtilsTests.testTransferGeneLocijalview.analysis.AlignmentUtilsTests.testTransferGeneLoci
|
1PASS
|
|
|
0.054404143
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_transparencyTwoFeaturesjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_transparencyTwoFeatures
|
1PASS
|
|
|
0.053540587
|
jalview.datamodel.MappedFeaturesTest.testFindProteinVariantsjalview.datamodel.MappedFeaturesTest.testFindProteinVariants
|
1PASS
|
|
|
0.050949913
|
jalview.commands.EditCommandTest.testPriorState_removeGapsMultipleSeqsjalview.commands.EditCommandTest.testPriorState_removeGapsMultipleSeqs
|
1PASS
|
|
|
0.050949913
|
jalview.commands.EditCommandTest.testPriorState_singleInsertjalview.commands.EditCommandTest.testPriorState_singleInsert
|
1PASS
|
|
|
0.050949913
|
jalview.io.SequenceAnnotationReportTest.testAppendFeature_virtualFeaturejalview.io.SequenceAnnotationReportTest.testAppendFeature_virtualFeature
|
1PASS
|
|
|
0.050949913
|
jalview.commands.EditCommandTest.testPriorState_removeAllGapsjalview.commands.EditCommandTest.testPriorState_removeAllGaps
|
1PASS
|
|
|
0.051813472
|
jalview.datamodel.SequenceTest.testCheckValidRangejalview.datamodel.SequenceTest.testCheckValidRange
|
1PASS
|
|
|
0.050949913
|
jalview.commands.EditCommandTest.testPriorState_multipleInsertsjalview.commands.EditCommandTest.testPriorState_multipleInserts
|
1PASS
|
|
|
0.051813472
|
jalview.io.PfamFormatInputTest.testPfamFormatNoLimitsjalview.io.PfamFormatInputTest.testPfamFormatNoLimits
|
1PASS
|
|
|
0.051813472
|
jalview.io.PhylipFileTests.testSequentialDataExtractionjalview.io.PhylipFileTests.testSequentialDataExtraction
|
1PASS
|
|
|
0.052677028
|
jalview.analysis.TestAlignSeq.testPrintAlignmentjalview.analysis.TestAlignSeq.testPrintAlignment
|
1PASS
|
|
|
0.051813472
|
jalview.project.Jalview2xmlTests.testMatrixToFloatsAndBackjalview.project.Jalview2xmlTests.testMatrixToFloatsAndBack
|
1PASS
|
|
|
0.050949913
|
jalview.commands.EditCommandTest.testPriorState_singleDeletejalview.commands.EditCommandTest.testPriorState_singleDelete
|
1PASS
|
|
|
0.051813472
|
jalview.io.PhylipFileTests.testInterleavedDataExtractionjalview.io.PhylipFileTests.testInterleavedDataExtraction
|
1PASS
|
|
|
0.052677028
|
jalview.datamodel.SequenceFeatureTest.testGetDetailsReport_virtualFeaturejalview.datamodel.SequenceFeatureTest.testGetDetailsReport_virtualFeature
|
1PASS
|
|
|
0.050086357
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappojalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_zappo
|
1PASS
|
|
|
0.050086357
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.buildPDBQueryTestjalview.gui.structurechooser.StructureChooserQuerySourceTest.buildPDBQueryTest
|
1PASS
|
|
|
0.050086357
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_nonejalview.renderer.ResidueColourFinderTest.testGetResidueColour_none
|
1PASS
|
|
|
0.050949913
|
jalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimportjalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimport
|
1PASS
|
|
|
0.050949913
|
jalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimportjalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimport
|
1PASS
|
|
|
0.050949913
|
jalview.commands.EditCommandTest.testPriorState_removeGappedColsjalview.commands.EditCommandTest.testPriorState_removeGappedCols
|
1PASS
|
|
|
0.050086357
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_nonejalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_none
|
1PASS
|
|
|
0.050086357
|
jalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdefjalview.renderer.OverviewResColourFinderTest.testGetResidueBoxColour_userdef
|
1PASS
|
|
|
0.050086357
|
jalview.datamodel.HiddenColumnsTest.testHideInsertionsForjalview.datamodel.HiddenColumnsTest.testHideInsertionsFor
|
1PASS
|
|
|
0.050086357
|
jalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReport_withEllipsisjalview.io.SequenceAnnotationReportTest.testCreateSequenceAnnotationReport_withEllipsis
|
1PASS
|
|
|
0.050086357
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdefjalview.renderer.ResidueColourFinderTest.testGetResidueColour_userdef
|
1PASS
|
|
|
0.050949913
|
jalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimportjalview.ws.dbsources.EBIAlphaFoldTest.checkPAEimport
|
1PASS
|
|
|
0.049222797
|
jalview.analysis.AlignmentUtilsTests.testIsMappablejalview.analysis.AlignmentUtilsTests.testIsMappable
|
1PASS
|
|
|
0.04835924
|
jalview.util.DBRefUtilsTest.testParseToDbRef_PDBjalview.util.DBRefUtilsTest.testParseToDbRef_PDB
|
1PASS
|
|
|
0.04835924
|
jalview.datamodel.SequenceTest.testInsertCharAtjalview.datamodel.SequenceTest.testInsertCharAt
|
1PASS
|
|
|
0.049222797
|
jalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappojalview.renderer.ResidueColourFinderTest.testGetResidueColour_zappo
|
1PASS
|
|
|
0.04749568
|
jalview.analysis.AlignmentUtilsTests.testHasCrossRefjalview.analysis.AlignmentUtilsTests.testHasCrossRef
|
1PASS
|
|
|
0.04749568
|
jalview.datamodel.SequenceTest.testIsProteinjalview.datamodel.SequenceTest.testIsProtein
|
1PASS
|
|
|
0.04835924
|
jalview.io.vcf.VCFLoaderTest.testLoadVCFContigjalview.io.vcf.VCFLoaderTest.testLoadVCFContig
|
1PASS
|
|
|
0.045768566
|
jalview.datamodel.AlignmentTest.testFindOrCreateForNullCalcIdjalview.datamodel.AlignmentTest.testFindOrCreateForNullCalcId
|
1PASS
|
|
|
0.046632126
|
jalview.analysis.AlignmentUtilsTests.testHaveCrossRefjalview.analysis.AlignmentUtilsTests.testHaveCrossRef
|
1PASS
|
|
|
0.045768566
|
jalview.datamodel.SequenceTest.testAddDBRefjalview.datamodel.SequenceTest.testAddDBRef
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblGenomeTest.testGetGenomicRangesFromFeaturesjalview.ext.ensembl.EnsemblGenomeTest.testGetGenomicRangesFromFeatures
|
1PASS
|
|
|
0.04404145
|
jalview.util.ComparisonTest.testIsNucleotide_sequencesjalview.util.ComparisonTest.testIsNucleotide_sequences
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblGeneTest.testGetTranscriptFeaturesjalview.ext.ensembl.EnsemblGeneTest.testGetTranscriptFeatures
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblCdnaTest.testGetGenomicRangesFromFeatures_mixedStrandjalview.ext.ensembl.EnsemblCdnaTest.testGetGenomicRangesFromFeatures_mixedStrand
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblCdnaTest.testGetGenomicRangesFromFeatures_reverseStrandjalview.ext.ensembl.EnsemblCdnaTest.testGetGenomicRangesFromFeatures_reverseStrand
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblGeneTest.testGetGenomicRangesFromFeatures_ncRNA_gene_reverseStrandjalview.ext.ensembl.EnsemblGeneTest.testGetGenomicRangesFromFeatures_ncRNA_gene_reverseStrand
|
1PASS
|
|
|
0.041450776
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_peptidejalview.gui.ColourMenuHelperTest.testAddMenuItems_peptide
|
1PASS
|
|
|
0.041450776
|
jalview.gui.ColourMenuHelperTest.testAddMenuItems_simpleOnlyjalview.gui.ColourMenuHelperTest.testAddMenuItems_simpleOnly
|
1PASS
|
|
|
0.042314336
|
jalview.datamodel.SequenceGroupTest.testContainsjalview.datamodel.SequenceGroupTest.testContains
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblGeneTest.testGetGenomicRangesFromFeaturesjalview.ext.ensembl.EnsemblGeneTest.testGetGenomicRangesFromFeatures
|
1PASS
|
|
|
0.04317789
|
jalview.util.DBRefUtilsTest.testParseToDbRefjalview.util.DBRefUtilsTest.testParseToDbRef
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblCdsTest.testGetGenomicRangesFromFeaturesjalview.ext.ensembl.EnsemblCdsTest.testGetGenomicRangesFromFeatures
|
1PASS
|
|
|
0.04317789
|
jalview.datamodel.SequenceTest.testFindPositionMapjalview.datamodel.SequenceTest.testFindPositionMap
|
1PASS
|
|
|
0.042314336
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testConstructorjalview.viewmodel.OverviewDimensionsShowHiddenTest.testConstructor
|
1PASS
|
|
|
0.042314336
|
jalview.datamodel.AlignmentTest.testGetWidthjalview.datamodel.AlignmentTest.testGetWidth
|
1PASS
|
|
|
0.041450776
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.041450776
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.041450776
|
jalview.datamodel.AlignmentTest.testSetDataset_selfReferencejalview.datamodel.AlignmentTest.testSetDataset_selfReference
|
1PASS
|
|
|
0.042314336
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testConstructorjalview.viewmodel.OverviewDimensionsHideHiddenTest.testConstructor
|
1PASS
|
|
|
0.04317789
|
jalview.ext.ensembl.EnsemblCdnaTest.testGetGenomicRangesFromFeaturesjalview.ext.ensembl.EnsemblCdnaTest.testGetGenomicRangesFromFeatures
|
1PASS
|
|
|
0.041450776
|
jalview.schemes.ResidueColourSchemeTest.testGetNamejalview.schemes.ResidueColourSchemeTest.testGetName
|
1PASS
|
|
|
0.041450776
|
jalview.schemes.ColourSchemePropertyTest.testGetColourNamejalview.schemes.ColourSchemePropertyTest.testGetColourName
|
1PASS
|
|
|
0.041450776
|
jalview.schemes.ResidueColourSchemeTest.testIsApplicableTojalview.schemes.ResidueColourSchemeTest.testIsApplicableTo
|
1PASS
|
|
|
0.04058722
|
mc_view.PDBfileTest.testIsRnamc_view.PDBfileTest.testIsRna
|
1PASS
|
|
|
0.041450776
|
jalview.commands.EditCommandTest.testAddEdit_multipleDeleteGapjalview.commands.EditCommandTest.testAddEdit_multipleDeleteGap
|
1PASS
|
|
|
0.041450776
|
jalview.io.NewickFileTests.testTreeIOjalview.io.NewickFileTests.testTreeIO
|
1PASS
|
|
|
0.041450776
|
jalview.analysis.AnnotationSorterTest.testSort_timingSemisortedjalview.analysis.AnnotationSorterTest.testSort_timingSemisorted
|
1PASS
|
|
|
0.041450776
|
jalview.analysis.AnnotationSorterTest.testSort_timingPresortedjalview.analysis.AnnotationSorterTest.testSort_timingPresorted
|
1PASS
|
|
|
0.041450776
|
jalview.datamodel.SequenceTest.testIsProteinWithXorNAmbiguityCodesjalview.datamodel.SequenceTest.testIsProteinWithXorNAmbiguityCodes
|
1PASS
|
|
|
0.041450776
|
jalview.schemes.ResidueColourSchemeTest.testIsApplicableTo_dynamicColourSchemejalview.schemes.ResidueColourSchemeTest.testIsApplicableTo_dynamicColourScheme
|
1PASS
|
|
|
0.041450776
|
jalview.schemes.ColourSchemePropertyTest.testGetColourSchemejalview.schemes.ColourSchemePropertyTest.testGetColourScheme
|
1PASS
|
|
|
0.041450776
|
jalview.datamodel.HiddenColumnsTest.testGetVisibleStartAndEndIndexjalview.datamodel.HiddenColumnsTest.testGetVisibleStartAndEndIndex
|
1PASS
|
|
|
0.041450776
|
jalview.analysis.AnnotationSorterTest.testSort_timingUnsortedjalview.analysis.AnnotationSorterTest.testSort_timingUnsorted
|
1PASS
|
|
|
0.042314336
|
jalview.datamodel.AlignmentTest.testFindGroupjalview.datamodel.AlignmentTest.testFindGroup
|
1PASS
|
|
|
0.042314336
|
jalview.datamodel.AlignmentTest.testGetVisibleWidthjalview.datamodel.AlignmentTest.testGetVisibleWidth
|
1PASS
|
|
|
0.03972366
|
mc_view.PDBChainTest.testMakeExactMappingmc_view.PDBChainTest.testMakeExactMapping
|
1PASS
|
|
|
0.03972366
|
jalview.datamodel.SequenceTest.testAddSequenceFeaturesjalview.datamodel.SequenceTest.testAddSequenceFeatures
|
1PASS
|
|
|
0.03972366
|
jalview.datamodel.SequenceTest.testUpdatePDBIdsjalview.datamodel.SequenceTest.testUpdatePDBIds
|
1PASS
|
|
|
0.03713299
|
jalview.ext.ensembl.EnsemblCdnaTest.testGetIdentifyingFeaturesjalview.ext.ensembl.EnsemblCdnaTest.testGetIdentifyingFeatures
|
1PASS
|
|
|
0.03626943
|
jalview.datamodel.SequenceGroupTest.testCopyConstructorjalview.datamodel.SequenceGroupTest.testCopyConstructor
|
1PASS
|
|
|
0.03713299
|
jalview.ext.ensembl.EnsemblCdsTest.testGetIdentifyingFeaturesjalview.ext.ensembl.EnsemblCdsTest.testGetIdentifyingFeatures
|
1PASS
|
|
|
0.037996545
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_featureTypeNotDisplayedjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_featureTypeNotDisplayed
|
1PASS
|
|
|
0.03713299
|
mc_view.PDBChainTest.testMakeResidueList_noAnnotationmc_view.PDBChainTest.testMakeResidueList_noAnnotation
|
1PASS
|
|
|
0.03713299
|
jalview.ext.ensembl.EnsemblGeneTest.testGetIdentifyingFeaturesjalview.ext.ensembl.EnsemblGeneTest.testGetIdentifyingFeatures
|
1PASS
|
|
|
0.037996545
|
jalview.analysis.ConservationTest.testVerdictjalview.analysis.ConservationTest.testVerdict
|
1PASS
|
|
|
0.03626943
|
jalview.analysis.DnaTest.testReverseSequencejalview.analysis.DnaTest.testReverseSequence
|
1PASS
|
|
|
0.03713299
|
jalview.datamodel.HiddenSequencesTest.testIsHiddenjalview.datamodel.HiddenSequencesTest.testIsHidden
|
1PASS
|
|
|
0.03626943
|
jalview.commands.EditCommandTest.testAddEdit_groupInsertGapsjalview.commands.EditCommandTest.testAddEdit_groupInsertGaps
|
1PASS
|
|
|
0.03713299
|
jalview.ext.ensembl.EnsemblGenomeTest.testGetIdentifyingFeaturesjalview.ext.ensembl.EnsemblGenomeTest.testGetIdentifyingFeatures
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.ConservationTest.testCalculate_thresholdjalview.analysis.ConservationTest.testCalculate_threshold
|
1PASS
|
|
|
0.033678755
|
mc_view.PDBChainTest.testMakeCaBondList_nucleotidemc_view.PDBChainTest.testMakeCaBondList_nucleotide
|
1PASS
|
|
|
0.034542315
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.buildThreeDBQueryTestjalview.gui.structurechooser.StructureChooserQuerySourceTest.buildThreeDBQueryTest
|
1PASS
|
|
|
0.034542315
|
jalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceAddedjalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceAdded
|
1PASS
|
|
|
0.034542315
|
jalview.datamodel.SequenceTest.testGetCharAtjalview.datamodel.SequenceTest.testGetCharAt
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.ConservationTest.testCalculate_noThresholdjalview.analysis.ConservationTest.testCalculate_noThreshold
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.AAFrequencyTest.testCalculate_noProfilejalview.analysis.AAFrequencyTest.testCalculate_noProfile
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.ConservationTest.testCountConservationAndGapsjalview.analysis.ConservationTest.testCountConservationAndGaps
|
1PASS
|
|
|
0.03626943
|
jalview.commands.EditCommandTest.testAddEdit_multipleInsertGapjalview.commands.EditCommandTest.testAddEdit_multipleInsertGap
|
1PASS
|
|
|
0.034542315
|
jalview.datamodel.SequenceGroupTest.testConstructor_listjalview.datamodel.SequenceGroupTest.testConstructor_list
|
1PASS
|
|
|
0.034542315
|
jalview.util.ComparisonTest.testIsNucleotideSequencejalview.util.ComparisonTest.testIsNucleotideSequence
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.AAFrequencyTest.testCompleteConsensus_includeGaps_showLogojalview.analysis.AAFrequencyTest.testCompleteConsensus_includeGaps_showLogo
|
1PASS
|
|
|
0.034542315
|
jalview.datamodel.SequenceTest.testGetStartGetEndjalview.datamodel.SequenceTest.testGetStartGetEnd
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.CrossRefTest.testSameSequencejalview.analysis.CrossRefTest.testSameSequence
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.AAFrequencyTest.testCalculate_withProfilejalview.analysis.AAFrequencyTest.testCalculate_withProfile
|
1PASS
|
|
|
0.03540587
|
jalview.analysis.AAFrequencyTest.testCompleteConsensus_ignoreGaps_noLogojalview.analysis.AAFrequencyTest.testCompleteConsensus_ignoreGaps_noLogo
|
1PASS
|
|
|
0.03195164
|
jalview.analysis.FinderTest.testFindNext_inSelectionjalview.analysis.FinderTest.testFindNext_inSelection
|
1PASS
|
|
|
0.0328152
|
jalview.io.AnnotatedPDBFileInputTest.checkNoDuplicatesjalview.io.AnnotatedPDBFileInputTest.checkNoDuplicates
|
1PASS
|
|
|
0.031088082
|
jalview.structure.StructureSelectionManagerTest.testRegisterMappingjalview.structure.StructureSelectionManagerTest.testRegisterMapping
|
1PASS
|
|
|
0.03195164
|
mc_view.PDBChainTest.testMakeCaBondListmc_view.PDBChainTest.testMakeCaBondList
|
1PASS
|
|
|
0.03195164
|
jalview.renderer.ResidueShaderTest.testFindColour_gapColourjalview.renderer.ResidueShaderTest.testFindColour_gapColour
|
1PASS
|
|
|
0.03195164
|
jalview.renderer.ResidueShaderTest.testApplyConservationjalview.renderer.ResidueShaderTest.testApplyConservation
|
1PASS
|
|
|
0.0328152
|
jalview.gui.StructureChooserTest.fetchStructuresInfoMockedTestjalview.gui.StructureChooserTest.fetchStructuresInfoMockedTest
|
1PASS
|
|
|
0.031088082
|
jalview.gui.AnnotationLabelsTest.testGetStatusMessagejalview.gui.AnnotationLabelsTest.testGetStatusMessage
|
1PASS
|
|
|
0.031088082
|
jalview.analysis.AlignSeqTest.testIndexEncode_nucleotidejalview.analysis.AlignSeqTest.testIndexEncode_nucleotide
|
1PASS
|
|
|
0.031088082
|
jalview.ext.htsjdk.TestHtsContigDb.testGetSequenceProxyjalview.ext.htsjdk.TestHtsContigDb.testGetSequenceProxy
|
1PASS
|
|
|
0.031088082
|
jalview.datamodel.MatchTest.testToStringjalview.datamodel.MatchTest.testToString
|
1PASS
|
|
|
0.031088082
|
jalview.analysis.AlignSeqTest.testIndexEncode_peptidejalview.analysis.AlignSeqTest.testIndexEncode_peptide
|
1PASS
|
|
|
0.031088082
|
jalview.gui.AnnotationLabelsTest.testGetTooltipjalview.gui.AnnotationLabelsTest.testGetTooltip
|
1PASS
|
|
|
0.031088082
|
jalview.gui.SeqPanelTest.testGetEditStatusMessage_lockedEditingjalview.gui.SeqPanelTest.testGetEditStatusMessage_lockedEditing
|
1PASS
|
|
|
0.031088082
|
jalview.structure.StructureSelectionManagerTest.testRegisterMappingsjalview.structure.StructureSelectionManagerTest.testRegisterMappings
|
1PASS
|
|
|
0.031088082
|
jalview.analysis.AlignSeqTest.testGlobalAlignmentjalview.analysis.AlignSeqTest.testGlobalAlignment
|
1PASS
|
|
|
0.031088082
|
jalview.datamodel.SequenceFeatureTest.testGetDetailsReportjalview.datamodel.SequenceFeatureTest.testGetDetailsReport
|
1PASS
|
|
|
0.031088082
|
jalview.gui.SeqPanelTest.testGetEditStatusMessagejalview.gui.SeqPanelTest.testGetEditStatusMessage
|
1PASS
|
|
|
0.031088082
|
jalview.datamodel.SearchResultsTest.testToStringjalview.datamodel.SearchResultsTest.testToString
|
1PASS
|
|
|
0.029360967
|
jalview.structure.StructureMappingTest.testEqualsjalview.structure.StructureMappingTest.testEquals
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.MappingTest.testCopyConstructorjalview.datamodel.MappingTest.testCopyConstructor
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.MatchTest.testEqualsjalview.datamodel.MatchTest.testEquals
|
1PASS
|
|
|
0.02849741
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.02849741
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testEquals_distinctSequencesjalview.datamodel.SearchResultsTest.testEquals_distinctSequences
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testAppendResultjalview.datamodel.SearchResultsTest.testAppendResult
|
1PASS
|
|
|
0.02849741
|
jalview.datamodel.SequenceTest.testGetAnnotation_forLabeljalview.datamodel.SequenceTest.testGetAnnotation_forLabel
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testHashcodejalview.datamodel.SearchResultsTest.testHashcode
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testEquals_orderDiffersjalview.datamodel.SearchResultsTest.testEquals_orderDiffers
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testMatchConstructorjalview.datamodel.SearchResultsTest.testMatchConstructor
|
1PASS
|
|
|
0.02849741
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testEqualsjalview.datamodel.SearchResultsTest.testEquals
|
1PASS
|
|
|
0.02849741
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testMatchContainsjalview.datamodel.SearchResultsTest.testMatchContains
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.DBRefEntryTest.testIsPrimaryCandidatejalview.datamodel.DBRefEntryTest.testIsPrimaryCandidate
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testMatchAdjacentjalview.datamodel.SearchResultsTest.testMatchAdjacent
|
1PASS
|
|
|
0.029360967
|
jalview.datamodel.SearchResultsTest.testAddResultjalview.datamodel.SearchResultsTest.testAddResult
|
1PASS
|
|
|
0.029360967
|
jalview.gui.StructureViewerTest.testGetSequencesForPdbsjalview.gui.StructureViewerTest.testGetSequencesForPdbs
|
1PASS
|
|
|
0.027633851
|
jalview.gui.StructureChooserTest.displayTDBQueryTestjalview.gui.StructureChooserTest.displayTDBQueryTest
|
1PASS
|
|
|
0.02849741
|
jalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerysjalview.gui.structurechooser.StructureChooserQuerySourceTest.cascadingThreeDBandPDBQuerys
|
1PASS
|
|
|
0.026770294
|
jalview.datamodel.MappingTest.testToStringjalview.datamodel.MappingTest.testToString
|
1PASS
|
|
|
0.025043178
|
jalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequencejalview.datamodel.HiddenSequencesTest.testHideShowSequence_withHiddenRepSequence
|
1PASS
|
|
|
0.025043178
|
jalview.datamodel.SequenceTest.testAddPDBIdjalview.datamodel.SequenceTest.testAddPDBId
|
1PASS
|
|
|
0.025043178
|
jalview.gui.StructureChooserTest.populateFilterComboBoxTestjalview.gui.StructureChooserTest.populateFilterComboBoxTest
|
1PASS
|
|
|
0.023316063
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_wordBoundariesjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_wordBoundaries
|
1PASS
|
|
|
0.021588946
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_twoScoresjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription_twoScores
|
1PASS
|
|
|
0.022452503
|
jalview.gui.PopupMenuTest.testBuildLinkMenujalview.gui.PopupMenuTest.testBuildLinkMenu
|
1PASS
|
|
|
0.01986183
|
jalview.analysis.ParsePropertiesTest.testGetScoresFromDescriptionjalview.analysis.ParsePropertiesTest.testGetScoresFromDescription
|
1PASS
|
|
|
0.017271157
|
jalview.commands.EditCommandTest.testAppendEdit_insertGapjalview.commands.EditCommandTest.testAppendEdit_insertGap
|
1PASS
|
|
|
0.018134715
|
jalview.datamodel.SequenceTest.testGetAlignmentAnnotations_forCalcIdLabelAndDescriptionjalview.datamodel.SequenceTest.testGetAlignmentAnnotations_forCalcIdLabelAndDescription
|
1PASS
|
|
|
0.018134715
|
jalview.datamodel.SequenceTest.testGetAlignmentAnnotations_forCalcIdAndLabeljalview.datamodel.SequenceTest.testGetAlignmentAnnotations_forCalcIdAndLabel
|
1PASS
|
|
|
0.018998273
|
jalview.commands.EditCommandTest.testAddEdit_removeAllGapsjalview.commands.EditCommandTest.testAddEdit_removeAllGaps
|
1PASS
|
|
|
0.0164076
|
jalview.analysis.FinderTest.testFindNextjalview.analysis.FinderTest.testFindNext
|
1PASS
|
|
|
0.0164076
|
jalview.analysis.FinderTest.testFindAll_maximalResultOnlyjalview.analysis.FinderTest.testFindAll_maximalResultOnly
|
1PASS
|
|
|
0.0164076
|
jalview.analysis.FinderTest.testFind_findAlljalview.analysis.FinderTest.testFind_findAll
|
1PASS
|
|
|
0.0164076
|
jalview.analysis.FinderTest.testFindAlljalview.analysis.FinderTest.testFindAll
|
1PASS
|
|
|
0.0164076
|
jalview.analysis.FinderTest.testFind_findNextjalview.analysis.FinderTest.testFind_findNext
|
1PASS
|
|
|
0.0164076
|
jalview.analysis.FinderTest.testFindAll_caseSensitivejalview.analysis.FinderTest.testFindAll_caseSensitive
|
1PASS
|
|
|
0.0164076
|
jalview.datamodel.SequenceTest.testGetAnnotationjalview.datamodel.SequenceTest.testGetAnnotation
|
1PASS
|
|
|
0.013816926
|
jalview.analysis.GroupingTest.testMakeGroupsWithBothjalview.analysis.GroupingTest.testMakeGroupsWithBoth
|
1PASS
|
|
|
0.013816926
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_gapPositionjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_gapPosition
|
1PASS
|
|
|
0.012953368
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenujalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu
|
1PASS
|
|
|
0.012953368
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_alreadyAddedjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_alreadyAdded
|
1PASS
|
|
|
0.013816926
|
jalview.gui.AlignFrameTest.testColourThresholdActionsjalview.gui.AlignFrameTest.testColourThresholdActions
|
1PASS
|
|
|
0.013816926
|
jalview.datamodel.SequenceTest.testAddAlignmentAnnotationjalview.datamodel.SequenceTest.testAddAlignmentAnnotation
|
1PASS
|
|
|
0.011226252
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_hideDisabledjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_hideDisabled
|
1PASS
|
|
|
0.01208981
|
jalview.datamodel.HiddenSequencesTest.testAdjustForHiddenSeqsjalview.datamodel.HiddenSequencesTest.testAdjustForHiddenSeqs
|
1PASS
|
|
|
0.012953368
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_notOnAlignmentjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_notOnAlignment
|
1PASS
|
|
|
0.010362694
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testNoFeaturesDisplayedjalview.renderer.seqfeatures.FeatureColourFinderTest.testNoFeaturesDisplayed
|
1PASS
|
|
|
0.010362694
|
jalview.io.JSONFileTest.testSeqParsedjalview.io.JSONFileTest.testSeqParsed
|
1PASS
|
|
|
0.010362694
|
jalview.fts.service.pdb.PDBFTSPanelTest.testgetPDBIdwithSpecifiedChainjalview.fts.service.pdb.PDBFTSPanelTest.testgetPDBIdwithSpecifiedChain
|
1PASS
|
|
|
0.010362694
|
jalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_noFeaturesShownjalview.renderer.seqfeatures.FeatureColourFinderTest.testFindFeatureColour_noFeaturesShown
|
1PASS
|
|
|
0.011226252
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenusjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus
|
1PASS
|
|
|
0.011226252
|
jalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_showDisabledjalview.gui.PopupMenuTest.testBuildAnnotationTypesMenus_showDisabled
|
1PASS
|
|
|
0.008635579
|
jalview.io.AnnotatedPDBFileInputTest.checkPDBSequenceFeaturesjalview.io.AnnotatedPDBFileInputTest.checkPDBSequenceFeatures
|
1PASS
|
|
|
0.008635579
|
jalview.analysis.TestAlignSeq.testGetMappingForS1jalview.analysis.TestAlignSeq.testGetMappingForS1
|
1PASS
|
|
|
0.006908463
|
jalview.datamodel.HiddenSequencesTest.testGetWidthjalview.datamodel.HiddenSequencesTest.testGetWidth
|
1PASS
|
|
|
0.006908463
|
jalview.datamodel.HiddenSequencesTest.testHideShowSequencejalview.datamodel.HiddenSequencesTest.testHideShowSequence
|
1PASS
|
|
|
0.006908463
|
jalview.datamodel.HiddenSequencesTest.testFindIndexWithoutHiddenSeqsjalview.datamodel.HiddenSequencesTest.testFindIndexWithoutHiddenSeqs
|
1PASS
|
|
|
0.006908463
|
jalview.datamodel.HiddenSequencesTest.testFindIndexNFromRowjalview.datamodel.HiddenSequencesTest.testFindIndexNFromRow
|
1PASS
|
|
|
0.006908463
|
jalview.datamodel.HiddenSequencesTest.testHideShowLastSequencesjalview.datamodel.HiddenSequencesTest.testHideShowLastSequences
|
1PASS
|
|
|
0.0043177893
|
jalview.viewmodel.ViewportRangesTest.testPageUpDownjalview.viewmodel.ViewportRangesTest.testPageUpDown
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testIsSymmetricjalview.analysis.scoremodels.ScoreMatrixTest.testIsSymmetric
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtStartjalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtStart
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testGetPairwiseScorejalview.analysis.scoremodels.ScoreMatrixTest.testGetPairwiseScore
|
1PASS
|
|
|
0.005181347
|
jalview.util.StringUtilsTest.testArrayToSeparatorListjalview.util.StringUtilsTest.testArrayToSeparatorList
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testDraggingjalview.viewmodel.OverviewDimensionsShowHiddenTest.testDragging
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.PIDModelTest.testComputePID_matchShortestSequencejalview.analysis.scoremodels.PIDModelTest.testComputePID_matchShortestSequence
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsAtStartjalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsAtStart
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testLastNextNoHiddenjalview.datamodel.VisibleRowsIteratorTest.testLastNextNoHidden
|
1PASS
|
|
|
0.005181347
|
jalview.gui.AnnotationChooserTest.testDeselectType_showForAlljalview.gui.AnnotationChooserTest.testDeselectType_showForAll
|
1PASS
|
|
|
0.005181347
|
jalview.gui.AnnotationChooserTest.testSelectType_showForSelectedjalview.gui.AnnotationChooserTest.testSelectType_showForSelected
|
1PASS
|
|
|
0.005181347
|
jalview.gui.AnnotationChooserTest.testSelectType_hideForSelectedjalview.gui.AnnotationChooserTest.testSelectType_hideForSelected
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testScrollRightWithHiddenjalview.viewmodel.ViewportRangesTest.testScrollRightWithHidden
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetViewportStartAndWidthWrappedjalview.viewmodel.ViewportRangesTest.testSetViewportStartAndWidthWrapped
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testLastNextEndHiddenjalview.datamodel.VisibleRowsIteratorTest.testLastNextEndHidden
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsAtEndjalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsAtEnd
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testScrollUpWithHiddenjalview.viewmodel.ViewportRangesTest.testScrollUpWithHidden
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetStartResjalview.viewmodel.ViewportRangesTest.testSetStartRes
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testBuildSymbolIndex_nonAsciijalview.analysis.scoremodels.ScoreMatrixTest.testBuildSymbolIndex_nonAscii
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testBuildSymbolIndexjalview.analysis.scoremodels.ScoreMatrixTest.testBuildSymbolIndex
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testToStableStringjalview.datamodel.features.FeatureMatcherSetTest.testToStableString
|
1PASS
|
|
|
0.005181347
|
jalview.gui.AlignmentPanelTest.testCalculateIdWidth_noArgsjalview.gui.AlignmentPanelTest.testCalculateIdWidth_noArgs
|
1PASS
|
|
|
0.005181347
|
jalview.io.EmblFlatFileTest.testAdjustForProteinLengthjalview.io.EmblFlatFileTest.testAdjustForProteinLength
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testLastNextWithHiddenjalview.datamodel.VisibleRowsIteratorTest.testLastNextWithHidden
|
1PASS
|
|
|
0.006044905
|
jalview.datamodel.AlignmentTest.testDeleteAllAnnotations_excludingAutocalculatedjalview.datamodel.AlignmentTest.testDeleteAllAnnotations_excludingAutocalculated
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsInMiddle
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testAndjalview.datamodel.features.FeatureMatcherSetTest.testAnd
|
1PASS
|
|
|
0.005181347
|
jalview.io.gff.SequenceOntologyLiteTest.testIsA_sequenceVariantjalview.io.gff.SequenceOntologyLiteTest.testIsA_sequenceVariant
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenRowsInMiddlejalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenRowsInMiddle
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testConstructorjalview.analysis.scoremodels.ScoreMatrixTest.testConstructor
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextEndHiddenjalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextEndHidden
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testScrollUpjalview.viewmodel.ViewportRangesTest.testScrollUp
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsInMiddle
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testScrollToVisiblejalview.viewmodel.ViewportRangesTest.testScrollToVisible
|
1PASS
|
|
|
0.005181347
|
jalview.io.FeaturesFileTest.testParseFiltersjalview.io.FeaturesFileTest.testParseFilters
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenRowsAtEndjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenRowsAtEnd
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureAttributesTest.testAttributeNameComparatorjalview.datamodel.features.FeatureAttributesTest.testAttributeNameComparator
|
1PASS
|
|
|
0.005181347
|
jalview.io.EmblFlatFileTest.testRemoveQuotesjalview.io.EmblFlatFileTest.testRemoveQuotes
|
1PASS
|
|
|
0.005181347
|
jalview.io.EmblFlatFileTest.testParse_codonStartNot1jalview.io.EmblFlatFileTest.testParse_codonStartNot1
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_gapDashjalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_gapDash
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextStartHiddenjalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextStartHidden
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.HiddenSequencesTest.testGetHiddenSequencejalview.datamodel.HiddenSequencesTest.testGetHiddenSequence
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewport
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testOutputMatrix_roundTripjalview.analysis.scoremodels.ScoreMatrixTest.testOutputMatrix_roundTrip
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testMatches_compoundKeyjalview.datamodel.features.FeatureMatcherSetTest.testMatches_compoundKey
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsInMiddlejalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsInMiddle
|
1PASS
|
|
|
0.005181347
|
jalview.util.StringUtilsTest.testInsertCharAtjalview.util.StringUtilsTest.testInsertCharAt
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureAttributesTest.testGetDescriptionjalview.datamodel.features.FeatureAttributesTest.testGetDescription
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testEventFiringjalview.viewmodel.ViewportRangesTest.testEventFiring
|
1PASS
|
|
|
0.005181347
|
jalview.structure.AtomSpecModelTest.testGetRangesjalview.structure.AtomSpecModelTest.testGetRanges
|
1PASS
|
|
|
0.005181347
|
jalview.util.StringUtilsTest.testGetLastTokenjalview.util.StringUtilsTest.testGetLastToken
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testMatches_byAttributejalview.datamodel.features.FeatureMatcherSetTest.testMatches_byAttribute
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureAttributesTest.testGetMinMaxjalview.datamodel.features.FeatureAttributesTest.testGetMinMax
|
1PASS
|
|
|
0.005181347
|
jalview.schemes.UserColourSchemeTest.testParseAppletParameterjalview.schemes.UserColourSchemeTest.testParseAppletParameter
|
1PASS
|
|
|
0.005181347
|
jalview.util.StringUtilsTest.testDeleteCharsjalview.util.StringUtilsTest.testDeleteChars
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testGetMatrixIndexjalview.analysis.scoremodels.ScoreMatrixTest.testGetMatrixIndex
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testcomputeSimilarity_matchShortestSequencejalview.analysis.scoremodels.ScoreMatrixTest.testcomputeSimilarity_matchShortestSequence
|
1PASS
|
|
|
0.006044905
|
jalview.datamodel.AlignmentTest.testDeleteAllAnnotations_includingAutocalculatedjalview.datamodel.AlignmentTest.testDeleteAllAnnotations_includingAutocalculated
|
1PASS
|
|
|
0.0034542314
|
jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotationsjalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotations
|
1PASS
|
|
|
0.0034542314
|
jalview.commands.TrimRegionCommandTest.testTrimRight_noColumnsjalview.commands.TrimRegionCommandTest.testTrimRight_noColumns
|
1PASS
|
|
|
0.0034542314
|
jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_noAnnotationsjalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_noAnnotations
|
1PASS
|
|
|
0.0034542314
|
jalview.analysis.RnaTest.testIsRnaSecondaryStructureSymboljalview.analysis.RnaTest.testIsRnaSecondaryStructureSymbol
|
1PASS
|
|
|
0.0043177893
|
jalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noReferenceAnnotationsjalview.gui.PopupMenuTest.testConfigureReferenceAnnotationsMenu_noReferenceAnnotations
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.PIDModelTest.testGetPairwiseScorejalview.analysis.scoremodels.PIDModelTest.testGetPairwiseScore
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.PIDModelTest.testComputePID_matchesComparisonPIDjalview.analysis.scoremodels.PIDModelTest.testComputePID_matchesComparisonPID
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetEndSeqjalview.viewmodel.ViewportRangesTest.testSetEndSeq
|
1PASS
|
|
|
0.005181347
|
jalview.io.FeaturesFileTest.testOutputFeatureFiltersjalview.io.FeaturesFileTest.testOutputFeatureFilters
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testPositionInBoxjalview.viewmodel.OverviewDimensionsShowHiddenTest.testPositionInBox
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testLastNextStartHiddenjalview.datamodel.VisibleRowsIteratorTest.testLastNextStartHidden
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testOutputMatrix_htmljalview.analysis.scoremodels.ScoreMatrixTest.testOutputMatrix_html
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_matrixTooBigjalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_matrixTooBig
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_matrixTooSmalljalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_matrixTooSmall
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetViewportWidthjalview.viewmodel.ViewportRangesTest.testSetViewportWidth
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenRowsAtStartjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenRowsAtStart
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testGetMinimumScorejalview.analysis.scoremodels.ScoreMatrixTest.testGetMinimumScore
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_matrixNotSquarejalview.analysis.scoremodels.ScoreMatrixTest.testConstructor_matrixNotSquare
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromMouseClickjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromMouseClick
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testEqualsAndHashCodejalview.analysis.scoremodels.ScoreMatrixTest.testEqualsAndHashCode
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetViewportHeightjalview.viewmodel.ViewportRangesTest.testSetViewportHeight
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureAttributesTest.testDatatypejalview.datamodel.features.FeatureAttributesTest.testDatatype
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testBlosum62_valuesjalview.analysis.scoremodels.ScoreMatrixTest.testBlosum62_values
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testSymmetricjalview.analysis.scoremodels.ScoreMatrixTest.testSymmetric
|
1PASS
|
|
|
0.005181347
|
jalview.schemes.UserColourSchemeTest.testToAppletParameterjalview.schemes.UserColourSchemeTest.testToAppletParameter
|
1PASS
|
|
|
0.005181347
|
jalview.schemes.UserColourSchemeTest.testConstructor_coloursArrayjalview.schemes.UserColourSchemeTest.testConstructor_coloursArray
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetViewportStartAndWidthjalview.viewmodel.ViewportRangesTest.testSetViewportStartAndWidth
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtEndjalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenColsAtEnd
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetStartEndSeqjalview.viewmodel.ViewportRangesTest.testSetStartEndSeq
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testGetAbsoluteAlignmentWidthjalview.viewmodel.ViewportRangesTest.testGetAbsoluteAlignmentWidth
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testGetAbsoluteAlignmentHeightjalview.viewmodel.ViewportRangesTest.testGetAbsoluteAlignmentHeight
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.HiddenSequencesTest.testGetFullAlignmentjalview.datamodel.HiddenSequencesTest.testGetFullAlignment
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetStartEndResWrappedjalview.viewmodel.ViewportRangesTest.testSetStartEndResWrapped
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testRemovejalview.datamodel.VisibleRowsIteratorTest.testRemove
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testGetMatchersjalview.datamodel.features.FeatureMatcherSetTest.testGetMatchers
|
1PASS
|
|
|
0.005181347
|
jalview.ws.sifts.SiftsClientTest.testSIFTsDownloadURLjalview.ws.sifts.SiftsClientTest.testSIFTsDownloadURL
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testGetMatrixjalview.analysis.scoremodels.ScoreMatrixTest.testGetMatrix
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetViewportStartAndHeightjalview.viewmodel.ViewportRangesTest.testSetViewportStartAndHeight
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testGetSizejalview.analysis.scoremodels.ScoreMatrixTest.testGetSize
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtStartjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtStart
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testFromStringjalview.datamodel.features.FeatureMatcherSetTest.testFromString
|
1PASS
|
|
|
0.005181347
|
jalview.util.StringUtilsTest.testCompareVersionsjalview.util.StringUtilsTest.testCompareVersions
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetStartSeqjalview.viewmodel.ViewportRangesTest.testSetStartSeq
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextWithHiddenjalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextWithHidden
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextNoHiddenjalview.datamodel.VisibleRowsIteratorTest.testHasNextAndNextNoHidden
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testToStringjalview.datamodel.features.FeatureMatcherSetTest.testToString
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsAtStartWrappedjalview.viewmodel.OverviewDimensionsShowHiddenTest.testFromMouseWithHiddenRowsAtStartWrapped
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtEndjalview.viewmodel.OverviewDimensionsShowHiddenTest.testSetBoxFromViewportHiddenColsAtEnd
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testComputePairwiseScoresjalview.analysis.scoremodels.ScoreMatrixTest.testComputePairwiseScores
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.features.FeatureMatcherSetTest.testIsEmptyjalview.datamodel.features.FeatureMatcherSetTest.testIsEmpty
|
1PASS
|
|
|
0.005181347
|
jalview.gui.AnnotationColumnChooserTest.testResetjalview.gui.AnnotationColumnChooserTest.testReset
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testGetMaximumScorejalview.analysis.scoremodels.ScoreMatrixTest.testGetMaximumScore
|
1PASS
|
|
|
0.005181347
|
jalview.schemes.TurnColourSchemeTest.testFindColourjalview.schemes.TurnColourSchemeTest.testFindColour
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetStartEndResjalview.viewmodel.ViewportRangesTest.testSetStartEndRes
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.PIDModelTest.testComputePID_matchLongestSequencejalview.analysis.scoremodels.PIDModelTest.testComputePID_matchLongestSequence
|
1PASS
|
|
|
0.005181347
|
jalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceDeletedjalview.datamodel.HiddenSequencesTest.testAdjustHeightSequenceDeleted
|
1PASS
|
|
|
0.005181347
|
jalview.io.gff.ExonerateHelperTest.testGetMappingTypejalview.io.gff.ExonerateHelperTest.testGetMappingType
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testViewportRangesjalview.viewmodel.ViewportRangesTest.testViewportRanges
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testSetStartResAndSeqjalview.viewmodel.ViewportRangesTest.testSetStartResAndSeq
|
1PASS
|
|
|
0.005181347
|
jalview.viewmodel.ViewportRangesTest.testScrollRightjalview.viewmodel.ViewportRangesTest.testScrollRight
|
1PASS
|
|
|
0.005181347
|
jalview.analysis.scoremodels.ScoreMatrixTest.testcomputeSimilarity_matchLongestSequencejalview.analysis.scoremodels.ScoreMatrixTest.testcomputeSimilarity_matchLongestSequence
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewport
|
1PASS
|
|
|
0.0025906735
|
jalview.io.AnnotatedPDBFileInputTest.checkAnnotationWiringjalview.io.AnnotatedPDBFileInputTest.checkAnnotationWiring
|
1PASS
|
|
|
0.0034542314
|
jalview.gui.SequenceRendererTest.testGetResidueColour_WithGroupjalview.gui.SequenceRendererTest.testGetResidueColour_WithGroup
|
1PASS
|
|
|
0.0034542314
|
jalview.gui.AlignmentPanelTest.testUpdateLayout_endResjalview.gui.AlignmentPanelTest.testUpdateLayout_endRes
|
1PASS
|
|
|
0.0034542314
|
jalview.io.cache.JvCacheableInputBoxTest.updateCacheTestjalview.io.cache.JvCacheableInputBoxTest.updateCacheTest
|
1PASS
|
|
|
0.0034542314
|
jalview.datamodel.SequenceTest.testSetDatasetSequence_toSelfjalview.datamodel.SequenceTest.testSetDatasetSequence_toSelf
|
1PASS
|
|
|
0.0034542314
|
jalview.analysis.RnaTest.testIsOpeningParenthesisjalview.analysis.RnaTest.testIsOpeningParenthesis
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.PopupMenuTest.testAddFeatureDetailsjalview.gui.PopupMenuTest.testAddFeatureDetails
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenRowsAtStartjalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenRowsAtStart
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.0017271157
|
jalview.util.StringUtilsTest.testParseIntjalview.util.StringUtilsTest.testParseInt
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsInMiddle
|
1PASS
|
|
|
0.0017271157
|
jalview.datamodel.AlignmentTest.testFindAnnotation_byCalcIdjalview.datamodel.AlignmentTest.testFindAnnotation_byCalcId
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenRowsAtEndjalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenRowsAtEnd
|
1PASS
|
|
|
0.0017271157
|
jalview.datamodel.AlignmentTest.testFindAnnotations_bySeqLabelandorCalcIdjalview.datamodel.AlignmentTest.testFindAnnotations_bySeqLabelandorCalcId
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsInMiddlejalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsInMiddle
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenRowsInMiddlejalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenRowsInMiddle
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testPositionInBoxjalview.viewmodel.OverviewDimensionsHideHiddenTest.testPositionInBox
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtStartjalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtStart
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationRowFilterTest.testGetAnnotationItemsjalview.gui.AnnotationRowFilterTest.testGetAnnotationItems
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AlignmentPanelTest.testSetScrollValuesjalview.gui.AlignmentPanelTest.testSetScrollValues
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testDraggingjalview.viewmodel.OverviewDimensionsHideHiddenTest.testDragging
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtStartjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtStart
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtEndjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenColsAtEnd
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenRowsInMiddlejalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenRowsInMiddle
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AnnotationLabelsTest.testDrawLabelsjalview.gui.AnnotationLabelsTest.testDrawLabels
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromMouseClickjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromMouseClick
|
1PASS
|
|
|
0.0017271157
|
jalview.fts.service.pdb.PDBFTSPanelTest.testDecodeSearchTermjalview.fts.service.pdb.PDBFTSPanelTest.testDecodeSearchTerm
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtEndjalview.viewmodel.OverviewDimensionsHideHiddenTest.testFromMouseWithHiddenColsAtEnd
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenRowsAtStartjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenRowsAtStart
|
1PASS
|
|
|
0.0017271157
|
jalview.commands.TrimRegionCommandTest.testTrimLeft_noColumnsjalview.commands.TrimRegionCommandTest.testTrimLeft_noColumns
|
1PASS
|
|
|
0.0017271157
|
jalview.gui.AlignViewportTest.testHideRevealSequencesjalview.gui.AlignViewportTest.testHideRevealSequences
|
1PASS
|
|
|
0.0017271157
|
jalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenRowsAtEndjalview.viewmodel.OverviewDimensionsHideHiddenTest.testSetBoxFromViewportHiddenRowsAtEnd
|
1PASS
|
|