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Coverage Report

  1. Project Clover database Mon Nov 11 2024 20:42:03 GMT
  2. Package mc_view

File Residue.java

 

Coverage histogram

../img/srcFileCovDistChart10.png
0% of files have more coverage

Code metrics

2
8
3
1
57
29
4
0.5
2.67
3
1.33

Classes

Class Line # Actions
Residue 25 8 4
1.0100%
 

Contributing tests

This file is covered by 63 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package mc_view;
22   
23    import java.util.Vector;
24   
 
25    public class Residue
26    {
27    Vector<Atom> atoms;
28   
29    int number;
30   
31    int count;
32   
 
33  48158 toggle public Residue(Vector<Atom> resAtoms, int number, int count)
34    {
35  48158 this.atoms = resAtoms;
36  48158 this.number = number;
37  48158 this.count = count;
38    }
39   
 
40  95694 toggle public Atom findAtom(String name)
41    {
42  95694 for (Atom atom : atoms)
43    {
44  95706 if (atom.name.equals(name))
45    {
46  95689 return atom;
47    }
48    }
49   
50  5 return null;
51    }
52   
 
53  37775 toggle public Vector<Atom> getAtoms()
54    {
55  37775 return this.atoms;
56    }
57    }