Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
ScaleRendererTest	38	39	1	1.0100%	Show methods

Class ScaleRendererTest

Class ScaleRendererTest	Line # 38	Total Statements 39	Complexity 1	TOTAL Coverage 1.0100%
testCalculateMarks() : void   testCalculateMarks() : void	4040	39.039	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	1.0	jalview.renderer.ScaleRendererTest.testCalculateMarksjalview.renderer.ScaleRendererTest.testCalculateMarks	1PASS

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.renderer;
22
23		import static org.testng.Assert.assertEquals;
24		import static org.testng.Assert.assertFalse;
25		import static org.testng.Assert.assertNull;
26		import static org.testng.Assert.assertTrue;
27
28		import jalview.gui.AlignFrame;
29		import jalview.gui.AlignViewport;
30		import jalview.io.DataSourceType;
31		import jalview.io.FileLoader;
32		import jalview.renderer.ScaleRenderer.ScaleMark;
33
34		import java.util.List;
35
36		import org.testng.annotations.Test;
37
		100% Uncovered Elements: 0 (40) Complexity: 1 Complexity Density: 0.03
38		public class ScaleRendererTest
39		{
		100% Uncovered Elements: 0 (39) Complexity: 1 Complexity Density: 0.03 1PASS
40	1	@Test(groups = "Functional")...
41		public void testCalculateMarks()
42		{
43	1	String data = ">Seq/20-45\nABCDEFGHIJKLMNOPQRSTUVWXYS\n";
44	1	AlignFrame af = new FileLoader().LoadFileWaitTillLoaded(data,
45		DataSourceType.PASTE);
46	1	AlignViewport av = af.getViewport();
47
48		/*
49		* scale has minor ticks at 5, 15, 25, major at 10 and 20
50		* (these are base 1, ScaleMark holds base 0 values)
51		*/
52	1	List<ScaleMark> marks = new ScaleRenderer().calculateMarks(av, 0, 25);
53	1	assertEquals(marks.size(), 5);
54
55	1	assertFalse(marks.get(0).major);
56	1	assertEquals(marks.get(0).column, 4);
57	1	assertNull(marks.get(0).text);
58
59	1	assertTrue(marks.get(1).major);
60	1	assertEquals(marks.get(1).column, 9);
61	1	assertEquals(marks.get(1).text, "10");
62
63	1	assertFalse(marks.get(2).major);
64	1	assertEquals(marks.get(2).column, 14);
65	1	assertNull(marks.get(2).text);
66
67	1	assertTrue(marks.get(3).major);
68	1	assertEquals(marks.get(3).column, 19);
69	1	assertEquals(marks.get(3).text, "20");
70
71	1	assertFalse(marks.get(4).major);
72	1	assertEquals(marks.get(4).column, 24);
73	1	assertNull(marks.get(4).text);
74
75		/*
76		* now hide columns 9-11 and 18-20 (base 1)
77		* scale marks are now in the same columns as before, but
78		* with column numbering adjusted for hidden columns
79		*/
80	1	av.hideColumns(8, 10);
81	1	av.hideColumns(17, 19);
82	1	marks = new ScaleRenderer().calculateMarks(av, 0, 25);
83	1	assertEquals(marks.size(), 5);
84	1	assertFalse(marks.get(0).major);
85	1	assertEquals(marks.get(0).column, 4);
86	1	assertNull(marks.get(0).text);
87	1	assertTrue(marks.get(1).major);
88	1	assertEquals(marks.get(1).column, 9);
89	1	assertEquals(marks.get(1).text, "13"); // +3 hidden columns
90	1	assertFalse(marks.get(2).major);
91	1	assertEquals(marks.get(2).column, 14);
92	1	assertNull(marks.get(2).text);
93	1	assertTrue(marks.get(3).major);
94	1	assertEquals(marks.get(3).column, 19);
95	1	assertEquals(marks.get(3).text, "26"); // +6 hidden columns
96	1	assertFalse(marks.get(4).major);
97	1	assertEquals(marks.get(4).column, 24);
98	1	assertNull(marks.get(4).text);
99		}
100		}