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Coverage Report

  1. Project Clover database Wed Nov 13 2024 16:21:17 GMT
  2. Package jalview.datamodel.features

File FeatureSource.java

 

Coverage histogram

../../../img/srcFileCovDistChart8.png
20% of files have more coverage

Code metrics

0
8
6
1
98
40
6
0.75
1.33
6
1

Classes

Class Line # Actions
FeatureSource 33 8 6
0.7142857371.4%
 

Contributing tests

This file is covered by 4 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.datamodel.features;
22   
23    import java.util.HashMap;
24    import java.util.Map;
25   
26    /**
27    * A class to model one source of feature data, including metadata about
28    * attributes of features
29    *
30    * @author gmcarstairs
31    *
32    */
 
33    public class FeatureSource implements FeatureSourceI
34    {
35    private String name;
36   
37    private Map<String, String> attributeNames;
38   
39    private Map<String, FeatureAttributeType> attributeTypes;
40   
41    /**
42    * Constructor
43    *
44    * @param theName
45    */
 
46  4 toggle public FeatureSource(String theName)
47    {
48  4 this.name = theName;
49  4 attributeNames = new HashMap<>();
50  4 attributeTypes = new HashMap<>();
51    }
52   
53    /**
54    * {@inheritDoc}
55    */
 
56  0 toggle @Override
57    public String getName()
58    {
59  0 return name;
60    }
61   
62    /**
63    * {@inheritDoc}
64    */
 
65  289 toggle @Override
66    public String getAttributeName(String attributeId)
67    {
68  289 return attributeNames.get(attributeId);
69    }
70   
71    /**
72    * {@inheritDoc}
73    */
 
74  0 toggle @Override
75    public FeatureAttributeType getAttributeType(String attributeId)
76    {
77  0 return attributeTypes.get(attributeId);
78    }
79   
80    /**
81    * {@inheritDoc}
82    */
 
83  13 toggle @Override
84    public void setAttributeName(String id, String attName)
85    {
86  13 attributeNames.put(id, attName);
87    }
88   
89    /**
90    * {@inheritDoc}
91    */
 
92  13 toggle @Override
93    public void setAttributeType(String id, FeatureAttributeType type)
94    {
95  13 attributeTypes.put(id, type);
96    }
97   
98    }