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Class AlignmentUtilsTests

 
AlignmentUtilsTests 3939 00 00 0.027
1.0100%
 
AlignmentUtilsTests.testBuildDnaVariantsMapAlignmentUtilsTests.testBuildDnaVariantsMap 154099886790131 Oct 15:14:27 1PASS 0.0020.002  
AlignmentUtilsTests.testAlignProteinAsDnaAlignmentUtilsTests.testAlignProteinAsDna 154099886785031 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testExpandContextAlignmentUtilsTests.testExpandContext 154099886791231 Oct 15:14:27 1PASS 0.0070.007  
AlignmentUtilsTests.testIsMappableAlignmentUtilsTests.testIsMappable 154099886793431 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testAddMappedPositionsAlignmentUtilsTests.testAddMappedPositions 154099886783731 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testExpandContext_annotationAlignmentUtilsTests.testExpandContext_annotation 154099886792031 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testHasCrossRefAlignmentUtilsTests.testHasCrossRef 154099886793131 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testTransferFeatures_withOmitAlignmentUtilsTests.testTransferFeatures_withOmit 154099886800631 Oct 15:14:28 1PASS 0.00  
AlignmentUtilsTests.testTransferFeaturesAlignmentUtilsTests.testTransferFeatures 154099886800431 Oct 15:14:28 1PASS 0.0010.001  
AlignmentUtilsTests.testAlignSequenceAs_withMapping_withUnmappedProteinAlignmentUtilsTests.testAlignSequenceAs_withMapping_withUnmappedProtein 154099886788831 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testComputePeptideVariantsAlignmentUtilsTests.testComputePeptideVariants 154099886790531 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testTranslatesAsAlignmentUtilsTests.testTranslatesAs 154099886801731 Oct 15:14:28 1PASS 0.00  
AlignmentUtilsTests.testAlignAs_alternateTranscriptsUngappedAlignmentUtilsTests.testAlignAs_alternateTranscriptsUngapped 154099886784631 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testGetSequencesByNameAlignmentUtilsTests.testGetSequencesByName 154099886793031 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testAlignSequenceAs_withTrailingPeptideAlignmentUtilsTests.testAlignSequenceAs_withTrailingPeptide 154099886789031 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMapCdnaToProtein_forSubsequenceAlignmentUtilsTests.testMapCdnaToProtein_forSubsequence 154099886795731 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMapCdsToProteinAlignmentUtilsTests.testMapCdsToProtein 154099886795831 Oct 15:14:27 1PASS 0.0020.002  
AlignmentUtilsTests.testMakeCdsAlignmentAlignmentUtilsTests.testMakeCdsAlignment 154099886794031 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testShowOrHideSequenceAnnotationsAlignmentUtilsTests.testShowOrHideSequenceAnnotations 154099886799631 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testAlignSequenceAs_mappedProteinProteinAlignmentUtilsTests.testAlignSequenceAs_mappedProteinProtein 154099886788131 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testFindCdsPositionsAlignmentUtilsTests.testFindCdsPositions 154099886792131 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testHaveCrossRefAlignmentUtilsTests.testHaveCrossRef 154099886793331 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testAlignSequenceAs_keepIntronGapsOnlyAlignmentUtilsTests.testAlignSequenceAs_keepIntronGapsOnly 154099886785331 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testTransferFeatures_withSelectAlignmentUtilsTests.testTransferFeatures_withSelect 154099886800731 Oct 15:14:28 1PASS 0.00  
AlignmentUtilsTests.testAlignSequenceAs_withMapping_withIntronsAlignmentUtilsTests.testAlignSequenceAs_withMapping_withIntrons 154099886788631 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMakeCdsAlignment_alternativeTranscriptsAlignmentUtilsTests.testMakeCdsAlignment_alternativeTranscripts 154099886794931 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testMakeCdsAlignment_filterProductsAlignmentUtilsTests.testMakeCdsAlignment_filterProducts 154099886795331 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMapProteinAlignmentToCdna_noXrefsAlignmentUtilsTests.testMapProteinAlignmentToCdna_noXrefs 154099886797331 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testAddMappedPositions_withStopCodonAlignmentUtilsTests.testAddMappedPositions_withStopCodon 154099886783931 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodonAlignmentUtilsTests.testAlignProteinAsDna_incompleteStartCodon 154099886785231 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMapProteinAlignmentToCdna_withXrefsAlignmentUtilsTests.testMapProteinAlignmentToCdna_withXrefs 154099886799531 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testTransferGeneLociAlignmentUtilsTests.testTransferGeneLoci 154099886801431 Oct 15:14:28 1PASS 0.0020.002  
AlignmentUtilsTests.testAlignAsSameSequencesAlignmentUtilsTests.testAlignAsSameSequences 154099886784231 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMakeCdsAlignment_multipleProteinsAlignmentUtilsTests.testMakeCdsAlignment_multipleProteins 154099886795531 Oct 15:14:27 1PASS 0.0010.001  
AlignmentUtilsTests.testAlignSequenceAs_withMapping_noIntronsAlignmentUtilsTests.testAlignSequenceAs_withMapping_noIntrons 154099886788331 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testAlignAsSameSequencesMultipleSubSeqAlignmentUtilsTests.testAlignAsSameSequencesMultipleSubSeq 154099886784431 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testFindCdsPositions_fivePrimeIncompleteAlignmentUtilsTests.testFindCdsPositions_fivePrimeIncomplete 154099886792631 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMapProteinAlignmentToCdna_prioritiseXrefsAlignmentUtilsTests.testMapProteinAlignmentToCdna_prioritiseXrefs 154099886799231 Oct 15:14:27 1PASS 0.00  
AlignmentUtilsTests.testMapProteinAlignmentToCdna_withStartAndStopCodonsAlignmentUtilsTests.testMapProteinAlignmentToCdna_withStartAndStopCodons 154099886799331 Oct 15:14:27 1PASS 0.0010.001