| Tests: | Testless build |
|---|---|
| Duration: | 1182 minutes |
| Changes: | No changes |
| Tests: | Testless build |
|---|---|
| Duration: | 2 minutes |
| Changes: | Who: Ben Soares <b.soares@dundee.ac.uk> Why: Merge branch "develop" into bug/JAL-4125_flatlaf_quithandler_warning_doesnt_display_properly Who: Ben Soares <b.soares@dundee.ac.uk> Why: JAL-4125 Move confirmation of closing external viewer windows into the quit handler, and allow all to close or not in closeViewer whilst quitting. Who: Ben Soares <b.soares@dundee.ac.uk> Why: Merge branch "improvement/JAL-3416_default_to_LIVE_DRAG_MODE_for_flatlaf" into merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064 Who: Ben Soares <b.soares@dundee.ac.uk> Why: JAL-3416 Added logoIcon to quit (and potentially other) dialogs Who: Ben Soares <b.soares@dundee.ac.uk> Why: JAL-4019 Clarification of position on "X" in help text ... |
| Tests: | Testless build |
|---|---|
| Duration: | 50 seconds |
| Changes: | Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-3858 fix check annotation row and column positioning in case we have been called during an annotation height change operation Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-1556 JAL-4090 colour by annotation options on annotation label popup menu Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-3858 improved contactInterval computation and added detailed test coverage for ContactGeometry - contactInterval.cStart/cEnd and pStart/pEnd are now base-0 inclusive ranges, always less than contactHeight and graphHeight - change in mapFor behaviour so cStart/cEnd and pStart/pEnd are always just one mapped range, not as many as requested to cover mapFor(pFrom,pTo) Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-3858 javadoc and slightly revised green linear shading - still not a perfect match to EBI AlphaFold Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-4090 figures in paematrix doc ... |
| Tests: | Testless build |
|---|---|
| Duration: | 3 minutes |
| Changes: | Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-4196 structure view cli tests wait using new jalview.Desktop.instance.operationsAreInProgress() returns true if any desktop windows have a progress indicator still active Who: Ben Soares <b.soares@dundee.ac.uk> Why: JAL-4001 Added a genuine client_id (from gtag). Added /debug/mp/collect with response content Who: Ben Soares <b.soares@dundee.ac.uk> Why: JAL-4513 now re-add the SwingUtilities.invokeAndWait() with minimal sleep Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-3855 auto select clusters and fix up colouring/propagation on calculation & tree display Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-3855 JAL-4124 test checks asymmetric matrices are stored and restored correctly ... |
| Tests: | Testless build |
|---|---|
| Duration: | < 1 second |
| Changes: | No changes |
| Tests: | Testless build |
|---|---|
| Duration: | < 1 second |
| Changes: | Who: Mungo Carstairs Why: JAL-3567 adjust layout of linked feature report, unit test Who: Ben Soares Why: JAL-3225 some fixes to build.gradle for working in Eclipse and not always changing doc/building.html Who: Mungo Carstairs Why: Merge branch "feature/JAL-3551Pymol" into feature/JAL-2422ChimeraX Who: Mungo Carstairs Why: JAL-3624 use temp file for SIFT download in JS, correct unmarshalling Who: Mungo Carstairs Why: JAL-3551 concatenate colour by sequence commands for all except PyMOL ... |
| Tests: | 1676 passed |
|---|---|
| Duration: | 15 minutes |
| Changes: | Who: James Procter <j.procter@dundee.ac.uk> Why: Merge branch "bug/JAL-244_interactingpngexportnotwysiwig" into develop Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-244 JAL-4090 use current IdWidth when exporting unwrapped alignment image. Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-4090 JAL-629 FER1+SPIOL -> FER1_SPIOL in command line example Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-629 JAL-4265 JAL-4286 report the filename for the exported structure image like we do for exported alignment images |
| Tests: | Testless build |
|---|---|
| Duration: | 9 minutes |
| Changes: | Who: James Procter <j.procter@dundee.ac.uk> Why: Merge branch "bug/JAL-244_interactingpngexportnotwysiwig" into develop Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-244 JAL-4090 use current IdWidth when exporting unwrapped alignment image. Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-629 JAL-4265 JAL-4286 report the filename for the exported structure image like we do for exported alignment images Who: James Procter <j.procter@dundee.ac.uk> Why: JAL-4090 JAL-629 FER1+SPIOL -> FER1_SPIOL in command line example |