Build #3

Build and run tests under Java 11

Build: #3 failed

Job: Clover and Tests failed

Stages & jobs

  1. Default Stage

Test results

  • 2,146 tests in total
  • 3 tests failed
  • 3 failures are new
  • 1 test was fixed
  • 6 minutes taken in total.

Build 3 has the following 3 errors: 3 new failure(s) occurred since the previous build.

New test failures 3
Status Test Duration
Collapse Failed CommandLineOperations testHeadlessModeOutputOperations(headless -open examples/uniref50.fa, -html, test/jalview/bin/test_uniref50_out.html, true, 4096, 15000, ) History
2 secs 
Classname: java.lang.AssertionError
Message: Didn't create an output -html file.[headless -open examples/uniref50.fa] expected [true] but found [false]
Stacktrace:
java.lang.AssertionError: Didn't create an output -html file.[headless -open examples/uniref50.fa] expected [true] but found [false]
at org.testng.Assert.fail(Assert.java:110)
at org.testng.Assert.failNotEquals(Assert.java:1413)
at org.testng.Assert.assertTrue(Assert.java:56)
at jalview.bin.CommandLineOperations.testHeadlessModeOutputOperations(CommandLineOperations.java:343)
(46 more lines...)
Collapse Failed StructureChooserTest openStructureFileForSequenceTest(examples/uniref50.fa, FER1_SPIOL, examples/AlphaFold/AF-P00221-F1-model_v4.cif, Default, examples/AlphaFold/AF-P00221-F1-predicted_aligned_error_v4.json, true, false, JMOL, 15, 7, 1, ) History
1 sec 
Classname: java.lang.AssertionError
Message: Wrong number of structure viewers opened expected:<1> but was:<0>
Stacktrace:
java.lang.AssertionError: Wrong number of structure viewers opened expected:<1> but was:<0>
at org.junit.Assert.fail(Assert.java:89)
at org.junit.Assert.failNotEquals(Assert.java:835)
at org.junit.Assert.assertEquals(Assert.java:647)
at jalview.gui.StructureChooserTest.__CLR4_4_1nqeoac434r(StructureChooserTest.java:358)
(47 more lines...)
Collapse Failed Jalview2xmlTests noDuplicatePdbMappingsMade History
1 sec 
Classname: java.lang.AssertionError
Message: Expected only two mappings for 1A70 expected [2] but found [0]
Stacktrace:
java.lang.AssertionError: Expected only two mappings for 1A70 expected [2] but found [0]
at org.testng.Assert.fail(Assert.java:110)
at org.testng.Assert.failNotEquals(Assert.java:1413)
at org.testng.Assert.assertEqualsImpl(Assert.java:149)
at org.testng.Assert.assertEquals(Assert.java:131)
(49 more lines...)