Build #3

Build and run tests under Java 11

Build: #3 failed Changes by Gitlab User

Build result summary

Details

Completed
Duration
25 minutes
Labels
None
Agent
Default Agent
Revision
7d35e28797636155c3de86cbdb1030eaf9110ecc 7d35e28797636155c3de86cbdb1030eaf9110ecc
Total tests
2146
Fixed in
#4 (Changes by Gitlab User)

Responsible

No one has taken responsibility for this failure

Code commits

Author Commit Message Commit date
Gitlab User Gitlab User 7d35e28797636155c3de86cbdb1030eaf9110ecc 7d35e28797636155c3de86cbdb1030eaf9110ecc Merge branch 'development/JAL-4107_merge_2115_212' into development/Release_2_12_Branch
Gitlab User Gitlab User c23740d0c922545a19b1f7396abb866c2a4ebc70 m c23740d0c922545a19b1f7396abb866c2a4ebc70 update from 2.11.5.1 final test fixes Merge branch 'development/Release_2_11_5_Branch' into development/JAL-4107_merge_2115_212
Gitlab User Gitlab User 4d0c90d7e29c7842bd1b903abe465f22d9853a4f m 4d0c90d7e29c7842bd1b903abe465f22d9853a4f JAL-4603 added addional patch and relocated the test data
Gitlab User Gitlab User c5ebb0734693e5ea2016da4033f5cbcd568ea03c m c5ebb0734693e5ea2016da4033f5cbcd568ea03c Merge branch 'bug/JAL-4603_Export_files_missing_part_of_sequence' into development/Release_2_11_5_Branch
Renia Correya Renia Correya db868848b73d9a08f5ee1b08a269436a41323446 m db868848b73d9a08f5ee1b08a269436a41323446 JAL-4603 Fixed failed tests in SeqCanvasTest

5 more changes...

Tests

New test failures 3
Status Test View job Duration
Collapse Failed CommandLineOperations testHeadlessModeOutputOperations(headless -open examples/uniref50.fa, -html, test/jalview/bin/test_uniref50_out.html, true, 4096, 15000, ) History
Clover and Tests 2 secs 
Classname: java.lang.AssertionError
Message: Didn't create an output -html file.[headless -open examples/uniref50.fa] expected [true] but found [false]
Stacktrace:
java.lang.AssertionError: Didn't create an output -html file.[headless -open examples/uniref50.fa] expected [true] but found [false]
at org.testng.Assert.fail(Assert.java:110)
at org.testng.Assert.failNotEquals(Assert.java:1413)
at org.testng.Assert.assertTrue(Assert.java:56)
at jalview.bin.CommandLineOperations.testHeadlessModeOutputOperations(CommandLineOperations.java:343)
(46 more lines...)
Collapse Failed StructureChooserTest openStructureFileForSequenceTest(examples/uniref50.fa, FER1_SPIOL, examples/AlphaFold/AF-P00221-F1-model_v4.cif, Default, examples/AlphaFold/AF-P00221-F1-predicted_aligned_error_v4.json, true, false, JMOL, 15, 7, 1, ) History
Clover and Tests 1 sec 
Classname: java.lang.AssertionError
Message: Wrong number of structure viewers opened expected:<1> but was:<0>
Stacktrace:
java.lang.AssertionError: Wrong number of structure viewers opened expected:<1> but was:<0>
at org.junit.Assert.fail(Assert.java:89)
at org.junit.Assert.failNotEquals(Assert.java:835)
at org.junit.Assert.assertEquals(Assert.java:647)
at jalview.gui.StructureChooserTest.__CLR4_4_1nqeoac434r(StructureChooserTest.java:358)
(47 more lines...)
Collapse Failed Jalview2xmlTests noDuplicatePdbMappingsMade History
Clover and Tests 1 sec 
Classname: java.lang.AssertionError
Message: Expected only two mappings for 1A70 expected [2] but found [0]
Stacktrace:
java.lang.AssertionError: Expected only two mappings for 1A70 expected [2] but found [0]
at org.testng.Assert.fail(Assert.java:110)
at org.testng.Assert.failNotEquals(Assert.java:1413)
at org.testng.Assert.assertEqualsImpl(Assert.java:149)
at org.testng.Assert.assertEquals(Assert.java:131)
(49 more lines...)
Fixed tests 1
Status Test Failing since View job Duration
Successful AlignmentActionListenerNotifiedTest jobStatusChanged_taskStatusChangedCalledWithJobStatus(UNKNOWN) History
Clover and Tests < 1 sec

JIRA issues

IssueDescriptionStatus
Unknown Issue TypeJAL-4107Could not obtain issue details from JIRA
Unknown Issue TypeJAL-4603Could not obtain issue details from JIRA