Gradle build with getdown and install4j

Jalview built by Gradle with getdown launcher and install4j packaging
None

JIRA Issues

This page lists the JIRA issues that have been linked to builds related to this plan, ordered by last built. This includes issues specified in commit messages, labels or comments for builds, as well as issues manually linked to builds.

JIRA Issues (20 issues)
Type Key Summary Status Assignee Fix versions Related Builds Last Built
Improvement JAL-3121 Allow export/import of map-value feature attributes via GFF3 Being tested Jim Procter 2.11.1, 2.11.1.0 3 related builds Last built: 1 week ago
Bug JAL-3153 Headless eclipse build fails with "An error occurred while automatically activating bundle org.eclipse.ui.externaltools" Closed Jim Procter 3 related builds Last built: 1 week ago
New Feature JAL-3187 Option to show CDS/peptide 'complement' features Ready for testing Jim Procter 2.11.1, 2.11.1.0 8 related builds Last built: 1 week ago
Improvement JAL-3289 CHANNEL build property to autoselect getdown appbase location for release, develop, local and bamboo builds Closed Ben Soares 2.11.0, 2.11.1 3 related builds Last built: 1 week ago
Bug JAL-3341 2 new test failures in CommandLineOperations Closed Ben Soares 2.11.1.0 3 related builds Last built: 1 week ago
Improvement JAL-3375 Better VCF numeric data field validation while parsing (e.g. AF* attributes) Closed Mungo Carstairs 2.11.1, 2.11.1.0 3 related builds Last built: 1 week ago
Improvement JAL-3376 Record 'fixed column' values POS, ID, QUAL, FILTER from VCF as Feature Attributes Closed Mungo Carstairs 2.11.1, 2.11.1.0 3 related builds Last built: 1 week ago
Bug JAL-3377 Alignment is misaligned in wrapped mode with annotation and exceptions thrown when only a few columns shown in wrapped mode Closed Mungo Carstairs 2.11.1, 2.11.1.0 3 related builds Last built: 1 week ago
Bug JAL-3386 Sequence ids missing in headless export of wrapped alignment figure with annotations Closed Mungo Carstairs 2.11.1, 2.11.1.0 2 related builds Last built: 1 week ago
Bug JAL-3388 Sorting Structure Chooser table by Sequence id fails with ClassCastException Closed Mungo Carstairs 2.11.1, 2.11.1.0 2 related builds Last built: 1 week ago
Bug JAL-3389 Chimera session not restored from Jalview Project Closed Mungo Carstairs 2.11.1, 2.11.1.0 2 related builds Last built: 1 week ago
Improvement JAL-3406 Update credits in jalview help documentation Open Jim Procter 2.11.2 2 related builds Last built: 1 week ago
Task JAL-3407 Release Jalview 2.11.1.0 Open Jim Procter 2.11.1, 2.11.1.0 6 related builds Last built: 1 week ago
Bug JAL-3441 Double-click on 'Show feature' selects columns Closed Mungo Carstairs 2.11.1, 2.11.1.0 2 related builds Last built: 1 week ago
Bug JAL-3473 SpinnerNumberModel causing IllegalArgumentException in some circumstances Closed Ben Soares 2.11.1, 2.11.1.0 2 related builds Last built: 1 week ago
Task JAL-3508 Move to 3 point version numbers (X.Y.Z.n) to denote incrermental releases and drop 'b' Open Jim Procter 2.11.1.0 2 related builds Last built: 1 week ago
Task JAL-3510 Update clover to 4.4.1 and ensure tests are clovered Closed Jim Procter 2.11.1.0 3 related builds Last built: 1 week ago
Task JAL-3513 include tests in clover coverage report Closed Jim Procter 2.11.1.0 2 related builds Last built: 1 week ago
Bug JAL-3523 OSX - Current working directory not preserved when Jalview.app launched with parameters from command line Open Ben Soares 2.11.1.1 2 related builds Last built: 1 week ago
Bug JAL-3525 Sequence IDs aligned to wrong margin and clipped in headless figure export when Right Align option enabled Open Jim Procter 2.11.1.1 2 related builds Last built: 1 week ago
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