Create the getdown release channel for Jalview.org
Build: #7 failed
Job: Default Job failed
Build log
The build generated 116 lines of output. Download or view full build log
| 13-Mar-2023 15:52:16 | Build Jalview Builds - Gradle getdown release - Default Job #7 (JB-GGR-JOB1-7) started building on agent Default Agent |
| 13-Mar-2023 15:52:16 | |
| 13-Mar-2023 15:52:16 | Build working directory is /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1 |
| 13-Mar-2023 15:52:16 | Executing build Jalview Builds - Gradle getdown release - Default Job #7 (JB-GGR-JOB1-7) |
| 13-Mar-2023 15:52:16 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 13-Mar-2023 15:52:16 | Checking out into /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1 |
| 13-Mar-2023 15:52:16 | Updating source code to revision: 82ccd1295e4b80f2b22950f2db2ee8dffe6f5969 |
| 13-Mar-2023 15:52:16 | Fetching 'refs/heads/develop' from 'http://source.jalview.org/git/jalview.git'. |
| 13-Mar-2023 15:52:16 | Checking out revision 82ccd1295e4b80f2b22950f2db2ee8dffe6f5969. |
| 13-Mar-2023 15:52:17 | Previous HEAD position was dd27b3a... JAL-629 Allow substitutions of {} = defaultCounter, {n} = autoCounter, {++n} = incremented autoCounter on args involving an output filename. |
| 13-Mar-2023 15:52:17 | Switched to a new branch 'develop' |
| 13-Mar-2023 15:52:17 | Branch develop set up to track remote branch develop from origin. |
| 13-Mar-2023 15:52:17 | Updated source code to revision: 82ccd1295e4b80f2b22950f2db2ee8dffe6f5969 |
| 13-Mar-2023 15:52:17 | Finished task 'Checkout Default Repository' with result: Success |
| 13-Mar-2023 15:52:17 | Running pre-build action: VCS Version Collector |
| 13-Mar-2023 15:52:17 | Running pre-build action: Artifactory Release Staging |
| 13-Mar-2023 15:52:17 | Starting task 'Jalview distribution for Java 11' of type 'org.jfrog.bamboo.bamboo-artifactory-plugin:artifactoryGradleTask' |
| 13-Mar-2023 15:52:17 | Bamboo Artifactory Plugin version: 2.6.2 |
| 13-Mar-2023 15:52:17 | Beginning to execute external process for build 'Jalview Builds - Gradle getdown release - Default Job #7 (JB-GGR-JOB1-7)' ... running command line: /home/bamboo/buildtools/gradle/bin/gradle -x test -PJAVA_VERSION=11 -PCHANNEL=RELEASE -PJALVIEW_VERSION=2.11 clean makeDist shadowJar getdown ... in: /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=develop bamboo_capability_system_builder_maven_Artifactory_Maven_3=/usr CATALINA_PID=/home/bamboo/latest/work/bamboo.pid bamboo_planRepository_1_branchDisplayName=develop bamboo_repository_revision_number=82ccd1295e4b80f2b22950f2db2ee8dffe6f5969 bamboo_resultsUrl=https://builds.jalview.org/browse/JB-GGR-JOB1-7 JAVA_OPTS=-Xms512m -Xmx1024m -Dbamboo.home=/srv/bamboo/bamboo-home -Djdk.tls.ephemeralDHKeySize=2048 bamboo_build_working_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1 bamboo_planRepository_1_name=Jalview Git bamboo_buildKey=JB-GGR-JOB1 bamboo_shortPlanName=Gradle getdown release bamboo_planRepository_name=Jalview Git LOGNAME=bamboo bamboo_buildNumber=7 PWD=/ bamboo_capability_system_builder_command_Eclipse_2019_09=/home/bamboo/buildtools/eclipse/jee-2019-09/eclipse/eclipse bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://builds.jalview.org/browse/JB-GGR-JOB1-7 bamboo_planRepository_repositoryUrl=http://source.jalview.org/git/jalview.git SHELL=/bin/bash bamboo_agentId=196609 bamboo_planName=Jalview Builds - Gradle getdown release bamboo_shortPlanKey=GGR bamboo_shortJobKey=JOB1 bamboo_capability_system_jdk_OpenJDK_11=/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk bamboo_planRepository_revision=82ccd1295e4b80f2b22950f2db2ee8dffe6f5969 bamboo_buildTimeStamp=2023-03-13T15:52:16.506Z bamboo_repository_previous_revision_number=f4195d8718b55ae3be9ecfaa101d24ae8cd251ce bamboo_planRepository_previousRevision=f4195d8718b55ae3be9ecfaa101d24ae8cd251ce bamboo_repository_git_branch=develop bamboo_buildResultKey=JB-GGR-JOB1-7 bamboo_repository_branch_name=develop bamboo_buildPlanName=Jalview Builds - Gradle getdown release - Default Job bamboo_capability_system_builder_ant_j11_Ant=/home/bamboo/buildtools/j11/ant-j11 bamboo_planRepository_1_revision=82ccd1295e4b80f2b22950f2db2ee8dffe6f5969 SHLVL=1 bamboo_capability_system_builder_ant_x11_Ant=/home/bamboo/buildtools/x11-ant bamboo_repository_name=Jalview Git JAVA_HOME=/home/bamboo/buildtools/jdk/jdk-11-linux-x64/jdk/ bamboo_dependenciesDisabled=false bamboo_repository_9175044_git_repositoryUrl=http://source.jalview.org/git/jalview.git LANG=en_GB.UTF-8 bamboo_buildFailed=false bamboo_repository_9175044_branch_name=develop bamboo_capability_system_jdk_OpenJDK_8=/home/bamboo/buildtools/jdk/jdk-8-linux-x64/jdk bamboo_planRepository_branch=develop bamboo_agentWorkingDirectory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609 bamboo_capability_system_git_executable=/bin/git bamboo_repository_git_username= bamboo_planRepository_1_previousRevision=f4195d8718b55ae3be9ecfaa101d24ae8cd251ce bamboo_planRepository_branchDisplayName=develop bamboo_planRepository_1_type=gitv2 bamboo_planRepository_branchName=develop bamboo_repository_9175044_revision_number=82ccd1295e4b80f2b22950f2db2ee8dffe6f5969 _=/usr/bin/java bamboo_capability_system_builder_ant_j11_x11_Ant=/home/bamboo/buildtools/j11/x11-ant-j11 bamboo_capability_system_builderivy_Ivy=/usr bamboo_repository_9175044_previous_revision_number=f4195d8718b55ae3be9ecfaa101d24ae8cd251ce bamboo_plan_storageTag=plan-8978439 bamboo_capability_system_builder_gradle_Gradle=/home/bamboo/buildtools/gradle bamboo_repository_9175044_git_username= bamboo_hg_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_hg-repositories-cache bamboo_planRepository_1_username= bamboo_planRepository_type=gitv2 USER=bamboo bamboo_git_cache_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/_git-repositories-cache bamboo_ManualBuildTriggerReason_userName=Soares bamboo_repository_git_repositoryUrl=http://source.jalview.org/git/jalview.git bamboo_capability_system_builder_ant_Ant=/usr/share/ant bamboo_capability_system_builder_mvn3_Maven_3=/usr/share/maven bamboo_tmp_directory=/srv/bamboo/bamboo-home/temp bamboo_repository_9175044_git_branch=develop bamboo_working_directory=/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1 bamboo_planKey=JB-GGR bamboo_planRepository_1_repositoryUrl=http://source.jalview.org/git/jalview.git bamboo_planRepository_username= HOME=/home/bamboo bamboo_planRepository_1_branchName=develop bamboo_repository_9175044_name=Jalview Git PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin |
| 13-Mar-2023 15:52:19 | |
| 13-Mar-2023 15:52:19 | > Configure project : |
| 13-Mar-2023 15:52:19 | Using properties from file './utils/channels/release/channel_gradle.properties' |
| 13-Mar-2023 15:52:19 | JALVIEW_VERSION is set to '2.11' |
| 13-Mar-2023 15:52:19 | HEADLESS BUILD |
| 13-Mar-2023 15:52:19 | J2S ENABLED |
| 13-Mar-2023 15:52:19 | Using a RELEASE profile. |
| 13-Mar-2023 15:52:19 | eclipseDir exists |
| 13-Mar-2023 15:52:19 | |
| 13-Mar-2023 15:52:19 | > Task :clean |
| 13-Mar-2023 15:52:19 | > Task :cleanPackageDir UP-TO-DATE |
| 13-Mar-2023 15:52:20 | > Task :copyHelp |
| 13-Mar-2023 15:52:21 | > Task :buildIndices |
| 13-Mar-2023 15:52:21 | > Task :copyResources |
| 13-Mar-2023 15:52:21 | > Task :copyChannelResources |
| 13-Mar-2023 15:52:21 | |
| 13-Mar-2023 15:52:21 | > Task :createBuildProperties |
| 13-Mar-2023 15:52:21 | Execution optimizations have been disabled for task ':createBuildProperties' to ensure correctness due to the following reasons: |
| 13-Mar-2023 15:52:21 | - Gradle detected a problem with the following location: '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/resources/resources_build'. Reason: Task ':createBuildProperties' uses this output of task ':copyChannelResources' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.4.2/userguide/validation_problems.html#implicit_dependency for more details about this problem. |
| 13-Mar-2023 15:52:21 | |
| 13-Mar-2023 15:52:21 | > Task :buildResources |
| 13-Mar-2023 15:52:22 | > Task :copyDocs |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | > Task :convertMdFiles |
| 13-Mar-2023 15:52:22 | Creating /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/resources/doc_build/doc/README-DMG_creation.html |
| 13-Mar-2023 15:52:22 | Creating /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/resources/doc_build/doc/releaseprocess.html |
| 13-Mar-2023 15:52:22 | Creating /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/resources/doc_build/doc/README-DMG_background_image_creation.html |
| 13-Mar-2023 15:52:22 | Creating /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/resources/doc_build/doc/building.html |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | FAILURE: Build failed with an exception. |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | * Where: |
| 13-Mar-2023 15:52:22 | Build file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build.gradle' line: 1499 |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | * What went wrong: |
| 13-Mar-2023 15:52:22 | Execution failed for task ':releasesTemplates'. |
| 13-Mar-2023 15:52:22 | > File /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/help/markdown/releases/release-2_11.md must be created for RELEASE |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | * Try: |
| 13-Mar-2023 15:52:22 | > Run with --stacktrace option to get the stack trace. |
| 13-Mar-2023 15:52:22 | > Run with --info or --debug option to get more log output. |
| 13-Mar-2023 15:52:22 | > Run with --scan to get full insights. |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | > Task :releasesTemplates FAILED |
| 13-Mar-2023 15:52:22 | Execution optimizations have been disabled for task ':releasesTemplates' to ensure correctness due to the following reasons: |
| 13-Mar-2023 15:52:22 | - Gradle detected a problem with the following location: '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/resources/help_build/help/html/releases.html'. Reason: Task ':buildIndices' uses this output of task ':releasesTemplates' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.4.2/userguide/validation_problems.html#implicit_dependency for more details about this problem. |
| 13-Mar-2023 15:52:22 | - Gradle detected a problem with the following location: '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/resources/help_build/help/html/whatsNew.html'. Reason: Task ':buildIndices' uses this output of task ':releasesTemplates' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.4.2/userguide/validation_problems.html#implicit_dependency for more details about this problem. |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | See https://docs.gradle.org/7.4.2/userguide/command_line_interface.html#sec:command_line_warnings |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | Execution optimizations have been disabled for 2 invalid unit(s) of work during this build to ensure correctness. |
| 13-Mar-2023 15:52:22 | Please consult deprecation warnings for more details. |
| 13-Mar-2023 15:52:22 | 10 actionable tasks: 9 executed, 1 up-to-date |
| 13-Mar-2023 15:52:22 | * Get more help at https://help.gradle.org |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | BUILD FAILED in 4s |
| 13-Mar-2023 15:52:22 | |
| 13-Mar-2023 15:52:22 | Failing task since return code of [/home/bamboo/buildtools/gradle/bin/gradle -x test -PJAVA_VERSION=11 -PCHANNEL=RELEASE -PJALVIEW_VERSION=2.11 clean makeDist shadowJar getdown] was 1 while expected 0 |
| 13-Mar-2023 15:52:22 | Finished task 'Jalview distribution for Java 11' with result: Failed |
| 13-Mar-2023 15:52:22 | Running post build plugin 'NCover Results Collector' |
| 13-Mar-2023 15:52:22 | Running post build plugin 'Artifact Copier' |
| 13-Mar-2023 15:52:22 | Publishing an artifact: Jalview executables |
| 13-Mar-2023 15:52:22 | Unable to publish artifact [Jalview executables]: the source directory /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/libs does not exist. |
| 13-Mar-2023 15:52:22 | The artifact hasn't been successfully published after 1.284 ms |
| 13-Mar-2023 15:52:22 | Publishing an artifact: install4j installers |
| 13-Mar-2023 15:52:22 | Unable to publish artifact [install4j installers]: the source directory /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/build/install4j does not exist. |
| 13-Mar-2023 15:52:22 | The artifact hasn't been successfully published after 69.40 μs |
| 13-Mar-2023 15:52:22 | Publishing an artifact: getdown-channel |
| 13-Mar-2023 15:52:22 | Unable to publish artifact [getdown-channel]: the source directory /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/getdown/website does not exist. |
| 13-Mar-2023 15:52:22 | The artifact hasn't been successfully published after 52.52 μs |
| 13-Mar-2023 15:52:22 | Publishing an artifact: Jalview getdown launcher |
| 13-Mar-2023 15:52:22 | Unable to publish artifact [Jalview getdown launcher]: the source directory /srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GGR-JOB1/getdown/files does not exist. |
| 13-Mar-2023 15:52:22 | The artifact hasn't been successfully published after 44.85 μs |
| 13-Mar-2023 15:52:22 | Running post build plugin 'Artifactory Release Management Staging' |
| 13-Mar-2023 15:52:22 | Running post build plugin 'Artifactory Build Info Copier' |
| 13-Mar-2023 15:52:22 | Running post build plugin 'Artifactory Gradle Properties Info Copier' |
| 13-Mar-2023 15:52:22 | Running post build plugin 'npm Cache Cleanup' |
| 13-Mar-2023 15:52:22 | Running post build plugin 'Clover Results Collector' |
| 13-Mar-2023 15:52:22 | Running post build plugin 'Docker Container Cleanup' |
| 13-Mar-2023 15:52:22 | Finalising the build... |
| 13-Mar-2023 15:52:22 | Stopping timer. |
| 13-Mar-2023 15:52:22 | Build JB-GGR-JOB1-7 completed. |
| 13-Mar-2023 15:52:22 | Running on server: post build plugin 'NCover Results Collector' |
| 13-Mar-2023 15:52:22 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 13-Mar-2023 15:52:22 | Running on server: post build plugin 'Clover Delta Calculator' |
| 13-Mar-2023 15:52:22 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 13-Mar-2023 15:52:22 | All post build plugins have finished |
| 13-Mar-2023 15:52:22 | Generating build results summary... |
| 13-Mar-2023 15:52:22 | Saving build results to disk... |
| 13-Mar-2023 15:52:22 | Logging substituted variables... |
| 13-Mar-2023 15:52:22 | Indexing build results... |
| 13-Mar-2023 15:52:22 | Finished building JB-GGR-JOB1-7. |