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Jalview Git
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Renia Correya b01e34e4193f67114db140e6aa32eb1ef7e5b38f
JAL-4435 Map annotation row to tree node
For secondary structure similarity, map annotation rows with the tree
nodes, apply group colour to secondary structure annotation labels when
tree groups are created. Also, highlight annotation labels based on the
selection of the nodes in the tree.- src/jalview/analysis/TreeBuilder.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/analysis/scoremodels/SecondaryStructureDistanceModel.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/api/AlignViewportI.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/api/analysis/ScoreModelI.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/controller/AlignViewController.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/datamodel/BinaryNode.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/datamodel/SequenceGroup.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/gui/AlignFrame.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/gui/AnnotationLabels.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/gui/TreeCanvas.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)
- src/jalview/viewmodel/AlignmentViewport.java (version b01e34e4193f67114db140e6aa32eb1ef7e5b38f) (diffs)