Build #2

Build: #2 was successful Child of JB-GDB752-5

Code commits

Jalview Gitlab

  • Gitlab User

    Gitlab User 4fc297c20f6f9a295459768bc694729e8c3e8ab5

    JAL-4673 fix tests and add the layered format one,.

    • test/jalview/io/LayeredDBNParserTest.java (version 4fc297c20f6f9a295459768bc694729e8c3e8ab5)
    • test/jalview/io/FileFormatsTest.java (version 4fc297c20f6f9a295459768bc694729e8c3e8ab5)
  • Gitlab User

    Gitlab User 09ed2c3f2c155d490662afba0f0e2a293567a175

    JAL-4673 fix imports and JAL-1551 formatting

    • src/jalview/io/LayeredDBNParser.java (version 09ed2c3f2c155d490662afba0f0e2a293567a175)
    • src/jalview/io/FileFormat.java (version 09ed2c3f2c155d490662afba0f0e2a293567a175)
  • Gitlab User

    Gitlab User d25a839993d58208d8e3d7d4da74b346b5a890f1

    JAL-4673 first working prototype - recognition of extended fasta LBN and parsing to extract per-chain sequences annotated with multiple distinct tracks

    • src/jalview/io/LayeredDBNParser.java (version d25a839993d58208d8e3d7d4da74b346b5a890f1)
    • src/jalview/io/IdentifyFile.java (version d25a839993d58208d8e3d7d4da74b346b5a890f1)
    • src/jalview/io/FileFormat.java (version d25a839993d58208d8e3d7d4da74b346b5a890f1)
    • examples/testdata/9CFN.lbn (version d25a839993d58208d8e3d7d4da74b346b5a890f1)
  • Gitlab User

    Gitlab User 26c1514da83097967a3da9a5ca9817241054eea5

    JAL-4176 - check if files have authoritative IDs and ignore non-protein sequences without primary refs

    • src/jalview/gui/StructureChooser.java (version 26c1514da83097967a3da9a5ca9817241054eea5)