Build: #10 was successful Child of JB-GDB625-2
JIRA issues
This page shows the JIRA issues that have been linked to this build. This includes issues specified in commit messages, labels or comments, as well as issues manually linked to this build.
| Type | Key | Summary | Status | Assignee | Fix versions | Related Builds | Operations |
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JAL-789 | allow the alignment parameters and score matrix to be set for a pairwise sequence alignment | Open | James Procter | 2.12.0 | 6 related builds | |
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JAL-1054 | jalview does not fetch from a URL containing a redirect | Closed | Ben Soares | 2.11.1_js, 2.11.4.0 | 5 related builds | |
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JAL-3018 | Check Ensembl REST change log, update version number | Open | James Procter | 3 related builds | ||
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JAL-3064 | Hookup Jalview-JS clipboard to the browser clipboard | Open | Unassigned | 3 related builds | ||
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JAL-3393 | DMG opened Finder window improvements | Reopened | Ben Soares | 2.11.1, 2.11.1.0 | 4 related builds | |
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JAL-3631 | Allow jalview auto-updates to download to and work from separate user-space directory | Closed | Ben Soares | 2.11.4.0 | 4 related builds | |
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JAL-4090 | Release 2.11.3.0 | Closed | James Procter | 2.11.3.0 | 7 related builds | |
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JAL-4100 | ncRNA and genes without product attributes are not imported from Genbank and EMBL format files | Open | Unassigned | 3 related builds | ||
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JAL-4111 | Allow gradle build to create suffixed DEVELOP-... builds with channel appbase | Closed | Ben Soares | 2.11.3.0, 2.12.0 | 4 related builds | |
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JAL-4159 | PaSiMap inclusion | Closed | Thomas Morell | 2.11.4.0 | 9 related builds | |
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JAL-4328 | Some ensembl queries may not work reliably in 2.11.3.0, 2.11.4.0 | Closed | Ben Soares | 2.11.4.0 | 3 related builds | |
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JAL-4349 | spurious output image .extensions cause jalview CLI execution to fail with Null Pointer Exception | Open | Unassigned | 2.11.4.1 | 5 related builds | |
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JAL-4386 | Calculate tree using secondary structure annotation | In Progress | Renia Correya | 2.11.4.0, 2.11.5.0 | 11 related builds | |
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JAL-4392 | Consensus secondary structure visualization for alignments | Closed | Renia Correya | 2.11.4.0 | 6 related builds | |
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JAL-4398 | The rendering of the text "Window" for the Window menu item is different to the other menus | Closed | Ben Soares | 2.11.4.0 | 3 related builds | |
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JAL-4414 | HTTP errors are often interpreted to the user as a file format error - and FileNotFound errors are not propagated from Web or Local file import | In Progress | Unassigned | 2.11.4.0, 2.11.4.1 | 7 related builds | |
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JAL-4418 | Jalview 2.11.4.0 release | Being documented | James Procter | 2.11.4.0 | 20 related builds | |
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JAL-4420 | Jalview could recognise .features, .annotations and .newick files belonging to an alignment file when all dragged-and-dropped onto it | In Progress | Ben Soares | 2.11.4.0, 2.11.5.0 | 4 related builds | |
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JAL-4421 | Release installer DMG does not display the background image | Ready for testing | Ben Soares | 2.11.4, 2.12 | 5 related builds | |
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JAL-4425 | optionally hide consensus/annotations when no data is available | In Progress | James Procter | 2.11.4.0, 2.11.5.0 | 5 related builds | |
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JAL-4427 | Annotation labels from protein disorder services include html tags from description | Closed | Renia Correya | 2.11.4.0 | 7 related builds | |
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JAL-4428 | integrate OSX codesigning scripts in jalview's repository | Reopened | James Procter | 2.11.4.1 | 7 related builds | |
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JAL-4436 | Colour by secondary structure conservation | In Progress | Renia Correya | 2.11.5.0 | 3 related builds | |
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JAL-4442 | can't quit Jalview 2.11.3.3 on Windows 11 (Terminal Server) | Closed | Ben Soares | 2.11.4.0 | 4 related builds | |
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JAL-4446 | display eta for PaSiMap and allow it to be cancelled | Closed | James Procter | 2.11.4.0 | 5 related builds | |
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JAL-4449 | Ensembl sequence retrieval broken in 2.11.4.0rc2 | Closed | Ben Soares | 2.11.4.0 | 3 related builds | |
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JAL-4450 | Sequence letter aspect ratio not set correctly when aspect ratio is very narrow after middle-mouse drag | Open | James Procter | 3 related builds | ||
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JAL-4451 | better handling of annotation rows with html descriptions but the same label | Closed | Renia Correya | 2.11.4.0 | 3 related builds | |
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JAL-4454 | "Getdown DEVELOP Channel" linkCheck fails if there's a link to whatsNew#experimental or releaseHistory from other help pages | Closed | James Procter | 2.11.4.0 | 4 related builds | |
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JAL-4460 | Adjusting the saved as file format via the Alignment window Save As... dialog box doesn't actually change the format used to save the alignment | Closed | Ben Soares | 2.11.4.0 | 7 related builds | |
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JAL-4461 | "Select format by extension" option in Jalview's "Save As" dialog's file type dropdown menu | Closed | Ben Soares | 2.11.4.0 | 7 related builds | |
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JAL-4464 | cannot store/restore group associated secondary structure consensus annotations | Open | James Procter | 2.11.5.0 | 4 related builds |