Create easy access JVL files/links for launching in Jalview Develop
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JIRA Issues
This page lists the JIRA issues that have been linked to builds related to this plan, ordered by last built. This includes issues specified in commit messages, labels or comments for builds, as well as issues manually linked to builds.
| Type | Key | Summary | Status | Assignee | Fix versions | Related Builds | Last Built |
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JA-4601 | Could not obtain issue details from JIRA | Last built: 6 hours ago | ||||
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JAL-2991 | Wrap view - export to SVG - IDs shown but not alignment area in exported graphic | Closed | James Procter | 2.10.4b1 | 3 related builds | Last built: 6 hours ago |
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JAL-3084 | Review / adapt Preferences panel for JalviewJS | Closed | Mungo Carstairs | 2.11.1_js, 2.11.2.0, 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-4243 | bio.tools record accompanying Jalview source code | Closed | Ben Soares | 2.11.3.0, 2.11.3.1, 2.11.3.2, 2.11.3.3, 2.11.4.0, 2.11.4.1, 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-4517 | store and restore trees linked to annotation rows in Jalview projects | Closed | Renia Correya | 2.11.5.0 | 8 related builds | Last built: 6 hours ago |
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JAL-4521 | allow trees for secondary structures when just one sequence is shown in alignment | Closed | Renia Correya | 2.11.5.1 | 4 related builds | Last built: 6 hours ago |
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JAL-4559 | Out of date command line argument style used in the JVL docs | Closed | Ben Soares | 2.11.5.1 | 7 related builds | Last built: 6 hours ago |
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JAL-4581 | Secondary Structure Provider Colours for 2.11.5.1 - JalviewJS | Closed | James Procter | 2.12.0, 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-4594 | Secondary structure consensus appears to overlap with other annotation | Closed | Renia Correya | 2.11.5.0, 2.12.0, 2.11.5.1 | 9 related builds | Last built: 6 hours ago |
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JAL-4601 | Manual import of JPred annotation data does not trigger display of secondary structure consensus | Closed | James Procter | 2.12.0, 2.11.5.1 | 4 related builds | Last built: 6 hours ago |
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JAL-4602 | Hide the 'All' secondary structure consensus annotation when just one type is available | Closed | Renia Correya | 2.12.0, 2.11.5.1 | 4 related builds | Last built: 6 hours ago |
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JAL-4603 | Export images of alignments missing part of sequence | Closed | Renia Correya | 2.12.0, 2.11.5.1 | 7 related builds | Last built: 6 hours ago |
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JAL-4604 | Jalview 2.11.5.0 not launching for second or subsequent times from 2.11.4.0 installation on Windows or Linux | Closed | Ben Soares | 2.11.5.1 | 4 related builds | Last built: 6 hours ago |
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JAL-4606 | Jmol doesn't interpret path correctly on university managed Windows desktop | Closed | James Procter | 2.11.5.1 | 8 related builds | Last built: 6 hours ago |
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JAL-4607 | install4j Windows installer wizard in dark mode needs background colour adjustment | Ready for testing | Ben Soares | 2.12.0, 2.11.5.1 | 4 related builds | Last built: 6 hours ago |
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JAL-4617 | Release 2.11.5.1 | In Progress | James Procter | 2.11.5.1 | 6 related builds | Last built: 6 hours ago |
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JAL-4626 | EMBL-EBI AlphaFold PAEs are not being imported | Closed | James Procter | 2.11.5.1 | 6 related builds | Last built: 6 hours ago |
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JAL-4631 | fix linkCheck stalling on bamboo build ? | Closed | James Procter | 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-4633 | Jalview shows nodes in secondary structure annotation tree as unlinked | Closed | James Procter | 2.12.0, 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-4634 | recode around SwingJS transpile of nested Array.stream ops with closure doesn't work | Closed | James Procter | 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-4635 | MultiHarmony service doesn't submit - reports redirect due to http->https | Closed | James Procter | 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-4638 | retrieve 6-10+ alphafold structures and superpose them fails on windows | Closed | James Procter | 2.11.5.1 | 7 related builds | Last built: 6 hours ago |
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JAL-835 | support for 'insertion positions' in a3m files [ was a2m - in UCSC speak) | Closed | James Procter | 2.11.5.1 | 5 related builds | Last built: 6 hours ago |
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JAL-2275 | Cannot view local structures imported via direct network mount (e.g. cifs/samba, onedrive, etc) | Ready for testing | James Procter | 2.11.5.0, 2.11.5.2, 2.12.0, 2.11.5.1 | 6 related builds | Last built: 4 months ago |
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JAL-2690 | No structure mapping made for CIF file imported by drag'n'drop of URL link | Open | James Procter | 2.11.5.2, 2.12.0 | 5 related builds | Last built: 4 months ago |