Creates the getdown channel for the Jalview Development edition
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JIRA Issues
This page lists the JIRA issues that have been linked to builds related to this plan, ordered by last built. This includes issues specified in commit messages, labels or comments for builds, as well as issues manually linked to builds.
| Type | Key | Summary | Status | Assignee | Fix versions | Related Builds | Last Built |
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JAL-2275 | Cannot view local structures imported via direct network mount (e.g. cifs/samba, onedrive, etc) | Ready for testing | James Procter | 2.11.5.0, 2.12.0, 2.11.5.1 | 6 related builds | Last built: 2 months ago |
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JAL-2690 | No structure mapping made for CIF file imported by drag'n'drop of URL link | Open | James Procter | 2.12.0, 2.11.5.2 | 5 related builds | Last built: 2 months ago |
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JAL-3726 | Sequence ID colourscheme is not applied when view restored from project | Closed | James Procter | 2.11.2, 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-3880 | show additional metadata along side annotation row labels | In Progress | James Procter | 2.11.5.0, 2.12.0 | 5 related builds | Last built: 2 months ago |
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JAL-3914 | Import model reliability scores encoded as temperature factor annotation with their correct name and semantics | Closed | James Procter | 2.11.5.0, 2.11.4, 2.11.5, 2.12.0 | 5 related builds | Last built: 2 months ago |
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JAL-3921 | structure view saved in project file as zero length entry - project load doesn't open viewer correctly | Closed | James Procter | 2.11.2.0, 2.11.3.0, 2.11.5.0 | 6 related builds | Last built: 2 months ago |
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JAL-3987 | Consensus secondary structure annotation rows for sequences with multiple sources of structural data | Closed | Renia Correya | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4077 | Saving a project with a Jmol view on windows doesn't restore Jmol views | Ready for testing | Unassigned | 2.11.5.0, 2.12.0, 2.11.5.1 | 6 related builds | Last built: 2 months ago |
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JAL-4333 | error while using 'Calculate > Translate as cDNA' | Closed | James Procter | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4334 | Uniprot parser does not support sequence features with 'unknown' start or end | Closed | James Procter | 2.11.3.0 | 5 related builds | Last built: 2 months ago |
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JAL-4350 | Easier to maintain autodiscovery of external structure viewers via exclusion list | Closed | Ben Soares | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4386 | Calculate tree using secondary structure annotation | Closed | Renia Correya | 2.11.4.0, 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4392 | Consensus secondary structure visualization for alignments | Closed | Renia Correya | 2.11.4.0, 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4397 | 8 tests are failing on linux that aren't on macOS and 1 test failing on both | Closed | Ben Soares | 2.11.4.0, 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4399 | Consensus annotations and Tree visualisations for sequence annotation | Open | Renia Correya | 2.11.5.0, 2.11.4, 2.12.0 | 5 related builds | Last built: 2 months ago |
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JAL-4411 | Record source metadata in 3D structure data derived/transferred annotation rows | Closed | Renia Correya | 2.11.4.0, 2.11.5.0 | 6 related builds | Last built: 2 months ago |
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JAL-4426 | Show number of sequences contributing to the consensus secondary structure in the status bar/tool tip | Closed | James Procter | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4428 | integrate OSX codesigning scripts in jalview's repository | Closed | James Procter | 2.11.4.0, 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4435 | Label sequence groups and shade tree internal nodes with diversity information | Closed | Renia Correya | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4436 | Colour by secondary structure conservation | Closed | Renia Correya | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4440 | Jmol view doesn't show all selected structures in 3d structure chooser mapped to sequences | In Progress | James Procter | 2.12.0 | 5 related builds | Last built: 2 months ago |
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JAL-4441 | optionally display source/provider for structure derived annotations along side the annotation label | Closed | James Procter | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4454 | Automatically manage 'experimental' feature documentation in release notes | Reopened | James Procter | 2.11.4.0, 2.11.5.0, 2.12.0 | 5 related builds | Last built: 2 months ago |
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JAL-4469 | Uniprot Sequence Fetcher dialog allows version numbers to be excluded when given a list of versioned Uniprot/KB accessions | Closed | Ben Soares | 2.11.5.0 | 5 related builds | Last built: 2 months ago |
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JAL-4474 | jalview command doesn't work on Windows when user has a Network homedir | Being tested | James Procter | 2.11.5.0 | 5 related builds | Last built: 2 months ago |