Build #20

Gradle Develop build but with stdout/sterr via --info

Build: #20 did not complete

Job: Clover and Tests did not complete

Stages & jobs

  1. Default Stage

Job result summary

Queued
Source updated
Started
Completed
Cancelled
Agent
Default Agent
Revision
847c502d6186eb62a30f37f608852e77c67c217f 847c502d6186eb62a30f37f608852e77c67c217f

Error summary

The build generated some errors. See the full build log for more details.

        at com.sun.java.help.search.DefaultIndexerKit.storeToken(DefaultIndexerKit.java:153)
        at com.sun.java.help.search.DefaultIndexerKit.parseIntoTokens(DefaultIndexerKit.java:106)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1056)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1028)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.handleText(HTMLIndexerKit.java:400)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.handleText(DocumentParser.java:271)
        at java.desktop/javax.swing.text.html.parser.Parser.handleText(Parser.java:409)
        at java.desktop/javax.swing.text.html.parser.Parser.startTag(Parser.java:480)
        at java.desktop/javax.swing.text.html.parser.Parser.parseTag(Parser.java:2054)
        at java.desktop/javax.swing.text.html.parser.Parser.parseContent(Parser.java:2195)
        at java.desktop/javax.swing.text.html.parser.Parser.parse(Parser.java:2372)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.parse(DocumentParser.java:135)
        at java.desktop/javax.swing.text.html.parser.ParserDelegator.parse(ParserDelegator.java:113)
        at com.sun.java.help.search.HTMLIndexerKit.parse(HTMLIndexerKit.java:105)
        at com.sun.java.help.search.Indexer.parseFile(Indexer.java:248)
        at com.sun.java.help.search.Indexer.compile(Indexer.java:208)
        at com.sun.java.help.search.Indexer.main(Indexer.java:76)
java.io.IOException: Can't store Document
        at com.sun.java.help.search.DefaultIndexerKit.storeToken(DefaultIndexerKit.java:153)
        at com.sun.java.help.search.DefaultIndexerKit.parseIntoTokens(DefaultIndexerKit.java:106)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1056)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1028)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.handleText(HTMLIndexerKit.java:400)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.handleText(DocumentParser.java:271)
        at java.desktop/javax.swing.text.html.parser.Parser.handleText(Parser.java:409)
        at java.desktop/javax.swing.text.html.parser.Parser.endTag(Parser.java:524)
        at java.desktop/javax.swing.text.html.parser.Parser.parseTag(Parser.java:1934)
        at java.desktop/javax.swing.text.html.parser.Parser.parseContent(Parser.java:2195)
        at java.desktop/javax.swing.text.html.parser.Parser.parse(Parser.java:2372)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.parse(DocumentParser.java:135)
        at java.desktop/javax.swing.text.html.parser.ParserDelegator.parse(ParserDelegator.java:113)
        at com.sun.java.help.search.HTMLIndexerKit.parse(HTMLIndexerKit.java:105)
        at com.sun.java.help.search.Indexer.parseFile(Indexer.java:248)
        at com.sun.java.help.search.Indexer.compile(Indexer.java:208)
        at com.sun.java.help.search.Indexer.main(Indexer.java:76)
java.io.IOException: Can't store Document
        at com.sun.java.help.search.DefaultIndexerKit.storeToken(DefaultIndexerKit.java:153)
        at com.sun.java.help.search.DefaultIndexerKit.parseIntoTokens(DefaultIndexerKit.java:106)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1056)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1028)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.handleText(HTMLIndexerKit.java:400)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.handleText(DocumentParser.java:271)
        at java.desktop/javax.swing.text.html.parser.Parser.handleText(Parser.java:409)
        at java.desktop/javax.swing.text.html.parser.Parser.endTag(Parser.java:524)
        at java.desktop/javax.swing.text.html.parser.Parser.parseTag(Parser.java:1934)
        at java.desktop/javax.swing.text.html.parser.Parser.parseContent(Parser.java:2195)
        at java.desktop/javax.swing.text.html.parser.Parser.parse(Parser.java:2372)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.parse(DocumentParser.java:135)
        at java.desktop/javax.swing.text.html.parser.ParserDelegator.parse(ParserDelegator.java:113)
        at com.sun.java.help.search.HTMLIndexerKit.parse(HTMLIndexerKit.java:105)
        at com.sun.java.help.search.Indexer.parseFile(Indexer.java:248)
        at com.sun.java.help.search.Indexer.compile(Indexer.java:208)
        at com.sun.java.help.search.Indexer.main(Indexer.java:76)
java.io.IOException: Can't store Document
        at com.sun.java.help.search.DefaultIndexerKit.storeToken(DefaultIndexerKit.java:153)
        at com.sun.java.help.search.DefaultIndexerKit.parseIntoTokens(DefaultIndexerKit.java:106)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1056)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1028)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.handleText(HTMLIndexerKit.java:400)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.handleText(DocumentParser.java:271)
        at java.desktop/javax.swing.text.html.parser.Parser.handleText(Parser.java:409)
        at java.desktop/javax.swing.text.html.parser.Parser.startTag(Parser.java:480)
        at java.desktop/javax.swing.text.html.parser.Parser.parseTag(Parser.java:2054)
        at java.desktop/javax.swing.text.html.parser.Parser.parseContent(Parser.java:2195)
        at java.desktop/javax.swing.text.html.parser.Parser.parse(Parser.java:2372)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.parse(DocumentParser.java:135)
        at java.desktop/javax.swing.text.html.parser.ParserDelegator.parse(ParserDelegator.java:113)
        at com.sun.java.help.search.HTMLIndexerKit.parse(HTMLIndexerKit.java:105)
        at com.sun.java.help.search.Indexer.parseFile(Indexer.java:248)
        at com.sun.java.help.search.Indexer.compile(Indexer.java:208)
        at com.sun.java.help.search.Indexer.main(Indexer.java:76)
java.io.IOException: Can't store Document
        at com.sun.java.help.search.DefaultIndexerKit.storeToken(DefaultIndexerKit.java:153)
        at com.sun.java.help.search.DefaultIndexerKit.parseIntoTokens(DefaultIndexerKit.java:106)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1056)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.addContent(HTMLIndexerKit.java:1028)
        at com.sun.java.help.search.HTMLIndexerKit$HTMLParserCallback.handleText(HTMLIndexerKit.java:400)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.handleText(DocumentParser.java:271)
        at java.desktop/javax.swing.text.html.parser.Parser.handleText(Parser.java:409)
        at java.desktop/javax.swing.text.html.parser.Parser.endTag(Parser.java:524)
        at java.desktop/javax.swing.text.html.parser.Parser.parseTag(Parser.java:1934)
        at java.desktop/javax.swing.text.html.parser.Parser.parseContent(Parser.java:2195)
        at java.desktop/javax.swing.text.html.parser.Parser.parse(Parser.java:2372)
        at java.desktop/javax.swing.text.html.parser.DocumentParser.parse(DocumentParser.java:135)
        at java.desktop/javax.swing.text.html.parser.ParserDelegator.parse(ParserDelegator.java:113)
        at com.sun.java.help.search.HTMLIndexerKit.parse(HTMLIndexerKit.java:105)
        at com.sun.java.help.search.Indexer.parseFile(Indexer.java:248)
        at com.sun.java.help.search.Indexer.compile(Indexer.java:208)
        at com.sun.java.help.search.Indexer.main(Indexer.java:76)
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDBI-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
Build was manually stopped.