Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
AnalysisModel	9	3	1	1.0100%	Show methods

Class AnalysisModel

Class AnalysisModel	Line # 9	Total Statements 3	Complexity 1	TOTAL Coverage 1.0100%
initAnnotationData() : void   initAnnotationData() : void	2525	3.03	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	1.0	jalview.project.Jalview2xmlTests.testPcaViewAssociationjalview.project.Jalview2xmlTests.testPcaViewAssociation	1PASS

 

Source view

1		package jalview.analysis;
2
3		import jalview.datamodel.AlignmentAnnotation;
4
5		import java.util.ArrayList;
6		import java.util.HashMap;
7		import java.util.List;
8
		100% Uncovered Elements: 0 (4) Complexity: 1 Complexity Density: 0.33
9		public abstract class AnalysisModel
10		{
11
12
13		// Map to store node pos : annotation details
14		// (additional details from annotation property)
15		public HashMap<Integer, String> annotationDetails;
16
17		public ArrayList<AlignmentAnnotation> ssAnnotationForSeqs;
18
19		public List<String> labels;
20
21		/**
22		* Initializes the data structures used to hold secondary structure
23		* and metadata during the process.
24		*/
		100% Uncovered Elements: 0 (3) Complexity: 1 Complexity Density: 0.33
25	1	public void initAnnotationData() {...
26	1	this.labels = new ArrayList<>();
27	1	this.annotationDetails = new HashMap<>();
28	1	this.ssAnnotationForSeqs = new ArrayList<>();
29		}
30
31		}