Package	Files	Average Method Complexity	TOTAL Coverage
jalview.workers jalview.workers	14.0 14	2.525862 2.53	0.55104166 0.5510416655.1%

Class	Methods	Average Method Complexity	TOTAL Coverage
AlignCalcManager2.PollableWorkerManager AlignCalcManager2.PollableWorkerManager	6.0 6	3.0 3	0.0 0.00%
AlignmentAnnotationFactory AlignmentAnnotationFactory	5.0 5	1.4 1.4	0.0 0.00%
AlignmentComparisonThread AlignmentComparisonThread	5.0 5	4.2 4.2	0.0 0.00%
ColumnCounterSetWorker ColumnCounterSetWorker	6.0 6	4.1666665 4.17	0.0 0.00%
AlignCalcWorker AlignCalcWorker	7.0 7	1.7142857 1.71	0.37777779 0.3777777937.8%
StrucConsensusThread StrucConsensusThread	4.0 4	4.75 4.75	0.7 0.770%
ConservationThread ConservationThread	4.0 4	5.0 5	0.70454544 0.7045454470.5%
InformationThread InformationThread	8.0 8	2.875 2.88	0.7222222 0.722222272.2%
AnnotationWorker AnnotationWorker	4.0 4	2.25 2.25	0.7368421 0.736842173.7%
AlignCalcManager2 AlignCalcManager2	24.0 24	1.8333334 1.83	0.74657536 0.7465753674.7%
SecondaryStructureConsensusThread SecondaryStructureConsensusThread	14.0 14	2.5714285 2.57	0.80701756 0.8070175680.7%
AlignCalcManager2.SimpleWorkerManager AlignCalcManager2.SimpleWorkerManager	4.0 4	2.75 2.75	0.8214286 0.821428682.1%
ConsensusThread ConsensusThread	13.0 13	2.0769231 2.08	0.875 0.87587.5%
ComplementConsensusThread ComplementConsensusThread	6.0 6	2.0 2	0.9166667 0.916666791.7%
AlignCalcManager2.WorkerManager AlignCalcManager2.WorkerManager	6.0 6	1.5 1.5	1.0 1.0100%