Project Clover database Wed Jan 7 2026 02:49:01 GMT

Package jalview.analysis.scoremodels

Branches:

222

Statements:

445

Methods:

91

Classes:

9

Files:

9

LOC:

2,188

NCLOC:

1,211

Total complexity:

230

Complexity density:

0.52

Statements/Method:

4.89

Methods/Class:

10.11

Average method complexity:

2.53

Package	Files	Average Method Complexity	TOTAL Coverage
jalview.analysis.scoremodels jalview.analysis.scoremodels	9.0 9	2.5274725 2.53	0.78100264 0.7810026478.1%

Class	Methods	Average Method Complexity	TOTAL Coverage
DistanceScoreModel DistanceScoreModel	2.0 2	1.0 1	0.0 0.00%
SmithWatermanModel SmithWatermanModel	7.0 7	1.5714285 1.57	0.0 0.00%
SimilarityParams SimilarityParams	9.0 9	2.2222223 2.22	0.265625 0.26562526.6%
SimilarityScoreModel SimilarityScoreModel	2.0 2	1.0 1	0.5 0.550%
PIDModel PIDModel	12.0 12	2.8333333 2.83	0.71028036 0.7102803671%
FeatureDistanceModel FeatureDistanceModel	10.0 10	2.5 2.5	0.88235295 0.8823529588.2%
ScoreModels ScoreModels	12.0 12	1.4166666 1.42	0.88235295 0.8823529588.2%
SecondaryStructureDistanceModel SecondaryStructureDistanceModel	12.0 12	3.75 3.75	0.8924051 0.892405189.2%
ScoreMatrix ScoreMatrix	25.0 25	2.96 2.96	0.962963 0.96296396.3%