Build #3

Build: #3 failed

Job: Clover and Tests failed

Stages & jobs

  1. Default Stage

Job result summary

Completed
Duration
11 minutes
Agent
Default Agent
Revision
6343fb679e94dec0d94366f19ed793109bc79aed 6343fb679e94dec0d94366f19ed793109bc79aed
Total tests
1914
Fixed in
#4 (Code changes detected)

Tests

  • 1,914 tests in total
  • 3 tests failed
  • 1 failure is new
  • 6 minutes taken in total.
New test failures 1
Status Test Duration
Collapse Failed Jalview2xmlTests testSaveAndLoadAnnotationBasedTree History
2 secs 
Classname: java.lang.NullPointerException
Message: null
Stacktrace:
java.lang.NullPointerException
	at jalview.gui.TreePanel.showStructureProviderColouredLines_actionPerformed(TreePanel.java:1136)
	at jalview.jbgui.GTreePanel$11.actionPerformed(GTreePanel.java:240)
	at java.desktop/javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1967)
	at java.desktop/javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2308)
(50 more lines...)
Existing test failures 2
Status Test Failing since Duration 
Classname: java.lang.AssertionError
Message: expected [26] but found [1]
Stacktrace:
java.lang.AssertionError: expected [26] but found [1]
	at org.testng.Assert.fail(Assert.java:94)
	at org.testng.Assert.failNotEquals(Assert.java:496)
	at org.testng.Assert.assertEquals(Assert.java:125)
	at org.testng.Assert.assertEquals(Assert.java:372)
(45 more lines...)
 
Classname: java.lang.IllegalArgumentException
Message: Can't get value of wrappedVisibleWidths from jalview.gui.SeqCanvas[,0,0,564x109,layout=java.awt.BorderLayout,alignmentX=0.0,alignmentY=0.0,border=,flags=9,maximumSize=,minimumSize=,preferredSize=]
Stacktrace:
java.lang.IllegalArgumentException: Can't get value of wrappedVisibleWidths from jalview.gui.SeqCanvas[,0,0,564x109,layout=java.awt.BorderLayout,alignmentX=0.0,alignmentY=0.0,border=,flags=9,maximumSize=,minimumSize=,preferredSize=]
	at junit.extensions.PA.getValue(PA.java:158)
	at jalview.gui.SeqCanvasTest.__CLR4_4_164gzpl3t8f(SeqCanvasTest.java:274)
	at jalview.gui.SeqCanvasTest.testCalculateWrappedGeometry_withAnnotations(SeqCanvasTest.java:226)
	at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
(52 more lines...)

Error summary

The build generated some errors. See the full build log for more details.

WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB733-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

1834 tests completed, 3 failed
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB733-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB733-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

FAILURE: Build failed with an exception.

* Where:
Build file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB733-JOB1/build.gradle' line: 1967

* What went wrong:
Failed tests!

* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
> Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 9m 52s