Package	Files	Average Method Complexity	TOTAL Coverage
jalview.schemes jalview.schemes	41.0 41	2.139881 2.14	0.8645081 0.864508186.5%

Class	Methods	Average Method Complexity	TOTAL Coverage
ColourSchemeLoader ColourSchemeLoader	1.0 1	7.0 7	0.0 0.00%
CovariationColourScheme CovariationColourScheme	7.0 7	1.5714285 1.57	0.0 0.00%
RNAHelicesColourChooser RNAHelicesColourChooser	2.0 2	4.0 4	0.0 0.00%
HMMMatchScoreColourScheme HMMMatchScoreColourScheme	17.0 17	2.0 2	0.22340426 0.2234042622.3%
RNAInteractionColourScheme RNAInteractionColourScheme	6.0 6	1.1666666 1.17	0.4 0.440%
ColourSchemes ColourSchemes	13.0 13	2.0 2	0.51282054 0.5128205451.3%
FeatureSettingsAdapter FeatureSettingsAdapter	8.0 8	1.0 1	0.625 0.62562.5%
AnnotationColourGradient AnnotationColourGradient	23.0 23	4.0869565 4.09	0.73333335 0.7333333573.3%
ColourSchemeProperty ColourSchemeProperty	4.0 4	2.75 2.75	0.75 0.7575%
ClustalxColourScheme ClustalxColourScheme	13.0 13	2.3076923 2.31	0.7711864 0.771186477.1%
RNAHelicesColour RNAHelicesColour	13.0 13	2.0769231 2.08	0.79452056 0.7945205679.5%
FollowerColourScheme FollowerColourScheme	5.0 5	1.0 1	0.8 0.880%
ScoreColourScheme ScoreColourScheme	5.0 5	1.8 1.8	0.8125 0.812581.2%
IdColourScheme IdColourScheme	9.0 9	1.2222222 1.22	0.82608694 0.8260869482.6%
UserColourScheme UserColourScheme	16.0 16	2.875 2.88	0.83536583 0.8353658383.5%
TCoffeeColourScheme TCoffeeColourScheme	8.0 8	2.5 2.5	0.852459 0.85245985.2%
ResidueColourScheme ResidueColourScheme	12.0 12	1.75 1.75	0.88095236 0.8809523688.1%
HmmerColourScheme HmmerColourScheme	11.0 11	1.7272727 1.73	0.88461536 0.8846153688.5%
FeatureColour FeatureColour	33.0 33	3.7575758 3.76	0.90105265 0.9010526590.1%
Consensus Consensus	5.0 5	1.8 1.8	0.90909094 0.9090909490.9%
PIDColourScheme PIDColourScheme	5.0 5	2.4 2.4	0.93333334 0.9333333493.3%
ResidueProperties ResidueProperties	34.0 34	2.3235295 2.32	0.97527045 0.9752704597.5%
BlossomColourScheme BlossomColourScheme	4.0 4	1.0 1	1.0 1.0100%
Blosum62ColourScheme Blosum62ColourScheme	6.0 6	2.0 2	1.0 1.0100%
BuriedColourScheme BuriedColourScheme	5.0 5	1.0 1	1.0 1.0100%
ClustalxColourScheme.ClustalColour ClustalxColourScheme.ClustalColour	1.0 1	1.0 1	1.0 1.0100%
ClustalxColourScheme.ConsensusColour ClustalxColourScheme.ConsensusColour	1.0 1	1.0 1	1.0 1.0100%
FlowerColourScheme FlowerColourScheme	4.0 4	1.0 1	1.0 1.0100%
HMMMatchScoreColourScheme.MatchProbReader HMMMatchScoreColourScheme.MatchProbReader	2.0 2	4.5 4.5	1.0 1.0100%
HelixColourScheme HelixColourScheme	5.0 5	1.0 1	1.0 1.0100%
HmmerGlobalBackground HmmerGlobalBackground	6.0 6	1.1666666 1.17	1.0 1.0100%
HmmerLocalBackground HmmerLocalBackground	6.0 6	1.1666666 1.17	1.0 1.0100%
HydrophobicColourScheme HydrophobicColourScheme	5.0 5	1.0 1	1.0 1.0100%
JalviewColourScheme JalviewColourScheme	3.0 3	1.0 1	1.0 1.0100%
NucleotideAmbiguityColourScheme NucleotideAmbiguityColourScheme	4.0 4	1.0 1	1.0 1.0100%
NucleotideColourScheme NucleotideColourScheme	4.0 4	1.0 1	1.0 1.0100%
OceanColourScheme OceanColourScheme	4.0 4	1.0 1	1.0 1.0100%
PurinePyrimidineColourScheme PurinePyrimidineColourScheme	4.0 4	1.0 1	1.0 1.0100%
StrandColourScheme StrandColourScheme	5.0 5	1.0 1	1.0 1.0100%
SunsetColourScheme SunsetColourScheme	4.0 4	1.0 1	1.0 1.0100%
TaylorColourScheme TaylorColourScheme	4.0 4	1.0 1	1.0 1.0100%
TurnColourScheme TurnColourScheme	5.0 5	1.0 1	1.0 1.0100%
ZappoColourScheme ZappoColourScheme	4.0 4	1.0 1	1.0 1.0100%