Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
JalviewFileView	37	51	20	0.650602465.1%	Show methods

Class JalviewFileView

Class JalviewFileView	Line # 37	Total Statements 51	Complexity 20	TOTAL Coverage 0.650602465.1%
loadExtensions() : void   loadExtensions() : void	4343	7.07	2.02	1.0 1.0100%
getTypeDescription(File) : String   getTypeDescription(File) : String	5858	6.06	3.03	0.9 0.990%
getDescriptionForExtension(String) : String   getDescriptionForExtension(String) : String	7676	4.04	2.02	1.0 1.0100%
getIcon(File) : Icon   getIcon(File) : Icon	8888	17.017	6.06	0.0 0.00%
getExtension(File) : String   getExtension(File) : String	132132	6.06	3.03	1.0 1.0100%
getImageIcon(String) : ImageIcon   getImageIcon(String) : ImageIcon	151151	11.011	4.04	1.0 1.0100%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.42168674	jalview.io.JalviewFileViewTest.testGetTypeDescriptionjalview.io.JalviewFileViewTest.testGetTypeDescription	1PASS
	0.21686748	jalview.io.JalviewFileViewTest.testGetImageIconjalview.io.JalviewFileViewTest.testGetImageIcon	1PASS
	0.10843374	jalview.io.JalviewFileViewTest.testGetExtensionjalview.io.JalviewFileViewTest.testGetExtension	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.io;
22
23		import java.util.Locale;
24
25		import jalview.util.MessageManager;
26
27		import java.io.File;
28		import java.net.URL;
29		import java.util.HashMap;
30		import java.util.Iterator;
31		import java.util.Map;
32
33		import javax.swing.Icon;
34		import javax.swing.ImageIcon;
35		import javax.swing.filechooser.FileView;
36
		65.1% Uncovered Elements: 29 (83) Complexity: 20 Complexity Density: 0.39
37		public class JalviewFileView extends FileView
38		{
39		private static Map<String, String> extensions;
40
41		private static Map<String, ImageIcon> icons;
42
		100% Uncovered Elements: 0 (9) Complexity: 2 Complexity Density: 0.29
43	1	private void loadExtensions()...
44		{
45	1	extensions = new HashMap<>();
46	1	for (FileFormatI ff : FileFormats.getInstance().getFormats())
47		{
48	26	String desc = ff.getName() + " file";
49	26	String exts = ff.getExtensions();
50	26	for (String ext : exts.split(","))
51		{
52	36	ext = ext.trim().toLowerCase(Locale.ROOT);
53	36	extensions.put(ext, desc + ("jar".equals(ext) ? " (old)" : ""));
54		}
55		}
56		}
57
		90% Uncovered Elements: 1 (10) Complexity: 3 Complexity Density: 0.5
58	26	@Override...
59		public String getTypeDescription(File f)
60		{
61	26	String extension = getExtension(f);
62
63	26	String type = getDescriptionForExtension(extension);
64
65	26	if (extension != null)
66		{
67	26	if (extensions.containsKey(extension))
68		{
69	25	type = extensions.get(extension).toString();
70		}
71		}
72
73	26	return type;
74		}
75
		100% Uncovered Elements: 0 (6) Complexity: 2 Complexity Density: 0.5
76	26	private String getDescriptionForExtension(String extension)...
77		{
78	26	synchronized (this)
79		{
80	26	if (extensions == null)
81		{
82	1	loadExtensions();
83		}
84		}
85	26	return extensions.get(extension);
86		}
87
		0% Uncovered Elements: 27 (27) Complexity: 6 Complexity Density: 0.35
88	0	@Override...
89		public Icon getIcon(File f)
90		{
91	0	String extension = getExtension(f);
92	0	Icon icon = null;
93	0	String type = getDescriptionForExtension(extension);
94
95	0	if (type == null)
96		{
97	0	Iterator<String> it = extensions.keySet().iterator();
98	0	EXTENSION: while (it.hasNext())
99		{
100	0	String ext = it.next();
101
102		// quick negative test
103	0	if (!f.getName().contains(ext))
104		{
105	0	continue EXTENSION;
106		}
107
108	0	BackupFilenameParts bfp = BackupFilenameParts
109		.currentBackupFilenameParts(f.getName(), ext, true);
110	0	if (bfp.isBackupFile())
111		{
112	0	extension = ext;
113	0	type = getDescriptionForExtension(extension)
114		+ MessageManager.getString("label.backup");
115	0	break;
116		}
117		}
118		}
119
120	0	if (type != null)
121		{
122	0	icon = getImageIcon("/images/file.png");
123		}
124
125	0	return icon;
126		}
127
128		/**
129		* Returns the extension of a file (part of the name after the last period),
130		* in lower case, or null if the name ends in or does not include a period.
131		*/
		100% Uncovered Elements: 0 (8) Complexity: 3 Complexity Density: 0.5
132	30	public static String getExtension(File f)...
133		{
134	30	String ext = null;
135	30	String s = f.getName();
136	30	int i = s.lastIndexOf('.');
137
138	30	if ((i > 0) && (i < (s.length() - 1)))
139		{
140	28	ext = s.substring(i + 1).toLowerCase(Locale.ROOT);
141		}
142
143	30	return ext;
144		}
145
146		/**
147		* Returns an ImageIcon, or null if the file was not found
148		*
149		* @param filePath
150		*/
		100% Uncovered Elements: 0 (17) Complexity: 4 Complexity Density: 0.36
151	6	protected ImageIcon getImageIcon(String filePath)...
152		{
153		/*
154		* we reuse a single icon object per path here
155		*/
156	6	synchronized (this)
157		{
158	6	if (icons == null)
159		{
160	1	icons = new HashMap<>();
161		}
162	6	if (!icons.containsKey(filePath))
163		{
164	4	ImageIcon icon = null;
165	4	URL imgURL = JalviewFileView.class.getResource(filePath);
166	4	if (imgURL != null)
167		{
168	2	icon = new ImageIcon(imgURL);
169		}
170		else
171		{
172	2	jalview.bin.Console.errPrintln(
173		"JalviewFileView.createImageIcon: Couldn't find file: "
174		+ filePath);
175		}
176	4	icons.put(filePath, icon);
177		}
178		}
179
180		/*
181		* return the image from the table (which may be null if
182		* icon creation failed)
183		*/
184	6	return icons.get(filePath);
185		}
186		}