Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
MsaI	22	0	0	-1.0 -	Show methods

Class MsaI

Class MsaI	Line # 22	Total Statements 0	Complexity 0	TOTAL Coverage -1.0 -

 

Contributing tests

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1		package jalview.ws.api;
2
3		import jalview.datamodel.SequenceI;
4		import jalview.ws.params.ArgumentI;
5		import jalview.ws.params.WsParamSetI;
6
7		import java.util.List;
8
9		/**
10		* MSA analysis interface
11		*
12		* @author jprocter
13		*
14		* Generic job submission/management model: - A service instance
15		* implements one or more analysis interfaces, a status interface, a
16		* progress interface, and one or more results interface, plus any
17		* informational/descriptional interfaces - analysis interfaces return
18		* JobId or throw exceptions/errors.
19		*
20		*
21		*/
		- Uncovered Elements: 0 (0) Complexity: 0 Complexity Density: -
22		public interface MsaI
23		{
24		/**
25		* Given a set of sequences
26		*
27		* @param toalign
28		* @param parameters
29		* @param list
30		* @return JobId or exceptions are thrown.
31		* @throws Throwable
32		*/
33		public JobId align(List<SequenceI> toalign, WsParamSetI parameters,
34		List<ArgumentI> list)
35		throws Throwable;
36		}