Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
MsaResult	23	25	12	0.00%	Show methods

Class MsaResult

Class MsaResult	Line # 23	Total Statements 25	Complexity 12	TOTAL Coverage 0.00%
MsaResult()   MsaResult()	3232	0.00	1.01	-1.0 -1.0 -
MsaResult(vamsas.objects.simple.Alignment)   MsaResult(vamsas.objects.simple.Alignment)	3636	1.01	1.01	0.0 0.00%
getMsa() : vamsas.objects.simple.Alignment   getMsa() : vamsas.objects.simple.Alignment	4646	1.01	1.01	0.0 0.00%
setMsa(vamsas.objects.simple.Alignment) : void   setMsa(vamsas.objects.simple.Alignment) : void	5656	1.01	1.01	0.0 0.00%
equals(java.lang.Object) : boolean   equals(java.lang.Object) : boolean	6161	14.014	5.05	0.0 0.00%
hashCode() : int   hashCode() : int	9696	8.08	3.03	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package vamsas.objects.simple;
22
		0% Uncovered Elements: 43 (43) Complexity: 12 Complexity Density: 0.48
23		public class MsaResult extends vamsas.objects.simple.Result
24		implements java.io.Serializable
25		{
26		private vamsas.objects.simple.Alignment msa;
27
28		private java.lang.Object __equalsCalc = null;
29
30		private boolean __hashCodeCalc = false;
31
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
32	0	public MsaResult()...
33		{
34		}
35
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
36	0	public MsaResult(vamsas.objects.simple.Alignment msa)...
37		{
38	0	this.msa = msa;
39		}
40
41		/**
42		* Gets the msa value for this MsaResult.
43		*
44		* @return msa
45		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
46	0	public vamsas.objects.simple.Alignment getMsa()...
47		{
48	0	return msa;
49		}
50
51		/**
52		* Sets the msa value for this MsaResult.
53		*
54		* @param msa
55		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
56	0	public void setMsa(vamsas.objects.simple.Alignment msa)...
57		{
58	0	this.msa = msa;
59		}
60
		0% Uncovered Elements: 22 (22) Complexity: 5 Complexity Density: 0.36
61	0	@Override...
62		public synchronized boolean equals(java.lang.Object obj)
63		{
64	0	if (obj == null)
65		{
66	0	return false;
67		}
68	0	if (!(obj instanceof MsaResult))
69		{
70	0	return false;
71		}
72
73	0	MsaResult other = (MsaResult) obj;
74
75	0	if (this == obj)
76		{
77	0	return true;
78		}
79
80	0	if (__equalsCalc != null)
81		{
82	0	return (__equalsCalc == obj);
83		}
84
85	0	__equalsCalc = obj;
86
87	0	boolean _equals;
88	0	_equals = super.equals(obj) && (((this.msa == null)
89		&& (other.getMsa() == null))
90		|| ((this.msa != null) && this.msa.equals(other.getMsa())));
91	0	__equalsCalc = null;
92
93	0	return _equals;
94		}
95
		0% Uncovered Elements: 12 (12) Complexity: 3 Complexity Density: 0.38
96	0	@Override...
97		public synchronized int hashCode()
98		{
99	0	if (__hashCodeCalc)
100		{
101	0	return 0;
102		}
103
104	0	__hashCodeCalc = true;
105
106	0	int _hashCode = super.hashCode();
107
108	0	if (getMsa() != null)
109		{
110	0	_hashCode += getMsa().hashCode();
111		}
112
113	0	__hashCodeCalc = false;
114
115	0	return _hashCode;
116		}
117		}