Package	Files	Average Method Complexity	TOTAL Coverage
jalview.analysis jalview.analysis	19.0 19	1.4537038 1.45	0.95216346 0.9521634695.2%

Class	Methods	Average Method Complexity	TOTAL Coverage
CrossRefTest CrossRefTest	21.0 21	1.0476191 1.05	0.57525086 0.5752508657.5%
AverageDistanceEngineTest AverageDistanceEngineTest	3.0 3	1.6666666 1.67	0.875 0.87587.5%
AAFrequencyTest AAFrequencyTest	11.0 11	1.0909091 1.09	0.9350649 0.935064993.5%
AlignmentUtilsTests AlignmentUtilsTests	57.0 57	1.1929824 1.19	0.9683544 0.968354496.8%
RnaTest RnaTest	13.0 13	6.230769 6.23	0.9705882 0.970588297.1%
TestAlignSeq TestAlignSeq	11.0 11	1.1818181 1.18	0.9777778 0.977777897.8%
AlignSeqTest AlignSeqTest	5.0 5	1.0 1	1.0 1.0100%
AlignmentAnnotationUtilsTest AlignmentAnnotationUtilsTest	11.0 11	1.0909091 1.09	1.0 1.0100%
AlignmentSorterTest AlignmentSorterTest	2.0 2	1.0 1	1.0 1.0100%
AnnotationSorterTest AnnotationSorterTest	15.0 15	1.3333334 1.33	1.0 1.0100%
CodingUtilsTest CodingUtilsTest	4.0 4	1.0 1	1.0 1.0100%
ConservationTest ConservationTest	6.0 6	1.0 1	1.0 1.0100%
DnaTest DnaTest	19.0 19	1.2105263 1.21	1.0 1.0100%
FinderTest FinderTest	20.0 20	1.0 1	1.0 1.0100%
GeneticCodesTest GeneticCodesTest	7.0 7	1.1428572 1.14	1.0 1.0100%
GroupingTest GroupingTest	2.0 2	2.0 2	1.0 1.0100%
ParsePropertiesTest ParsePropertiesTest	5.0 5	1.0 1	1.0 1.0100%
SeqsetUtilsTest SeqsetUtilsTest	2.0 2	1.0 1	1.0 1.0100%
SequenceIdMatcherTest SequenceIdMatcherTest	2.0 2	1.0 1	1.0 1.0100%