Build #4

Build: #4 failed

Job: Clover and Tests failed

Stages & jobs

  1. Default Stage

Job result summary

Completed
Duration
11 minutes
Agent
Default Agent
Revision
acbb7d39481e53918a63f69cd008b4f6bbd7a588 acbb7d39481e53918a63f69cd008b4f6bbd7a588
Total tests
1904
Fixed in
#5 (Manual run by James Procter)

Tests

  • 1,904 tests in total
  • 1 test failed
  • 1 failure is new
  • 2 tests were fixed
  • 7 minutes taken in total.
New test failures 1
Status Test Duration
Collapse Failed AnnotationLabelsTest2 testIdWidthChanges(./test/files/annotation_label_width/sample.a2m, true, 50, 70, 100, ./examples/test_fab41.result/test_fab41_unrelaxed_rank_1_model_3.pdb, ./examples/test_fab41.result/test_fab41_unrelaxed_rank_1_model_3_scores.json, true, pLDDT, , 114, 117) History
1 sec 
Classname: java.lang.AssertionError
Message: idWidth (221) is not narrower than 117 expected [true] but found [false]
Stacktrace:
java.lang.AssertionError: idWidth (221) is not narrower than 117 expected [true] but found [false]
	at org.testng.Assert.fail(Assert.java:94)
	at org.testng.Assert.failNotEquals(Assert.java:496)
	at org.testng.Assert.assertTrue(Assert.java:42)
	at jalview.gui.AnnotationLabelsTest2.__CLR4_4_140rce13thp(AnnotationLabelsTest2.java:158)
(43 more lines...)
Fixed tests 2
Status Test Failing since Duration
Successful CommandsTest2 do_structureOpeningArgsTest(--gui --nonews --nosplash --debug --nowebservicediscovery --props=test/jalview/bin/commandsTest.jvprops --open=./examples/uniref50.fa --structuresfile=./examples/structuresfile.txt , -1, -1, -1, 1) History
2 secs
Successful FileFormatsTest testGetReadableFormats History
< 1 sec

Error summary

The build generated some errors. See the full build log for more details.

WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB729-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB729-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

62 tests completed, 1 failed
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by jalview.gui.Desktop (file:/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB729-JOB1/build/clover/clover-classes/) to field sun.awt.X11.XToolkit.awtAppClassName
WARNING: Please consider reporting this to the maintainers of jalview.gui.Desktop
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

FAILURE: Build failed with an exception.

* Where:
Build file '/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB729-JOB1/build.gradle' line: 1967

* What went wrong:
Failed tests!

* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
> Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 9m 39s