Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
UserColourSchemeTest	32	46	4	1.0100%	Show methods

Class UserColourSchemeTest

Class UserColourSchemeTest	Line # 32	Total Statements 46	Complexity 4	TOTAL Coverage 1.0100%
setUpJvOptionPane() : void   setUpJvOptionPane() : void	3535	2.02	1.01	1.0 1.0100%
testParseAppletParameter() : void   testParseAppletParameter() : void	4242	30.030	1.01	1.0 1.0100%
testToAppletParameter() : void   testToAppletParameter() : void	8080	3.03	1.01	1.0 1.0100%
testConstructor_coloursArray() : void   testConstructor_coloursArray() : void	9595	11.011	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	0.62	jalview.schemes.UserColourSchemeTest.testParseAppletParameterjalview.schemes.UserColourSchemeTest.testParseAppletParameter	1PASS
	0.24	jalview.schemes.UserColourSchemeTest.testConstructor_coloursArrayjalview.schemes.UserColourSchemeTest.testConstructor_coloursArray	1PASS
	0.08	jalview.schemes.UserColourSchemeTest.testToAppletParameterjalview.schemes.UserColourSchemeTest.testToAppletParameter	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.schemes;
22
23		import static org.testng.AssertJUnit.assertEquals;
24
25		import jalview.gui.JvOptionPane;
26
27		import java.awt.Color;
28
29		import org.testng.annotations.BeforeClass;
30		import org.testng.annotations.Test;
31
		100% Uncovered Elements: 0 (50) Complexity: 4 Complexity Density: 0.09
32		public class UserColourSchemeTest
33		{
34
		100% Uncovered Elements: 0 (2) Complexity: 1 Complexity Density: 0.5
35	1	@BeforeClass(alwaysRun = true)...
36		public void setUpJvOptionPane()
37		{
38	1	JvOptionPane.setInteractiveMode(false);
39	1	JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
40		}
41
		100% Uncovered Elements: 0 (30) Complexity: 1 Complexity Density: 0.03 1PASS
42	1	@Test(groups = "Functional")...
43		public void testParseAppletParameter()
44		{
45	1	UserColourScheme cs = new UserColourScheme("white");
46	1	cs.parseAppletParameter("D,E=red; K,R,H=0022FF; c=10 , 20,30");
47	1	assertEquals(Color.RED, cs.findColour('D'));
48	1	assertEquals(Color.RED, cs.findColour('d'));
49	1	assertEquals(Color.RED, cs.findColour('E'));
50	1	assertEquals(Color.RED, cs.findColour('e'));
51	1	Color c1 = new Color(0x0022ff);
52	1	assertEquals(c1, cs.findColour('K'));
53	1	assertEquals(c1, cs.findColour('R'));
54	1	assertEquals(c1, cs.findColour('h'));
55	1	Color c2 = new Color(10, 20, 30);
56	1	assertEquals(c2, cs.findColour('c'));
57	1	assertEquals(Color.WHITE, cs.findColour('G'));
58	1	assertEquals(Color.WHITE, cs.findColour('-'));
59	1	assertEquals(Color.WHITE, cs.findColour('.'));
60	1	assertEquals(Color.WHITE, cs.findColour(' '));
61
62	1	cs = new UserColourScheme("white");
63	1	cs.parseAppletParameter(
64		"D,E=red; K,R,H=0022FF; c=10 , 20,30;t=orange;lowercase=blue;s=pink");
65	1	assertEquals(Color.RED, cs.findColour('D'));
66	1	assertEquals(Color.blue, cs.findColour('d'));
67	1	assertEquals(Color.RED, cs.findColour('E'));
68	1	assertEquals(Color.blue, cs.findColour('e'));
69	1	assertEquals(c1, cs.findColour('K'));
70	1	assertEquals(c1, cs.findColour('R'));
71	1	assertEquals(Color.blue, cs.findColour('h'));
72	1	assertEquals(c2, cs.findColour('c'));
73		// 'lowercase' sets all lower-case not already set to the given colour
74	1	assertEquals(Color.orange, cs.findColour('t'));
75	1	assertEquals(Color.blue, cs.findColour('k'));
76	1	assertEquals(Color.blue, cs.findColour('a'));
77	1	assertEquals(Color.pink, cs.findColour('s'));
78		}
79
		100% Uncovered Elements: 0 (3) Complexity: 1 Complexity Density: 0.33 1PASS
80	1	@Test(groups = "Functional")...
81		public void testToAppletParameter()
82		{
83	1	UserColourScheme cs = new UserColourScheme(
84		"E,D=red; K,R,H=0022FF; c=10 , 20,30");
85	1	String param = cs.toAppletParameter();
86	1	assertEquals("D,E=ff0000;H,K,R=0022ff;c=0a141e", param);
87		}
88
89		/**
90		* Test for user colour scheme constructed with a colour per residue,
91		* including gap. Note this can currently be done from the User Defined
92		* Colours dialog, but not by parsing a colours parameter, as
93		* parseAppletParameter only recognises amino acid codes.
94		*/
		100% Uncovered Elements: 0 (11) Complexity: 1 Complexity Density: 0.09 1PASS
95	1	@Test(groups = "Functional")...
96		public void testConstructor_coloursArray()
97		{
98	1	Color g = Color.green;
99	1	Color y = Color.yellow;
100	1	Color b = Color.blue;
101	1	Color r = Color.red;
102		// colours for ARNDCQEGHILKMFPSTWYVBZ and gap
103	1	Color[] colours = new Color[] { g, y, b, r, g, y, r, b, g, y, r, b, g,
104		y, r, b, g, y, r, b, g, y, r, g };
105	1	UserColourScheme cs = new UserColourScheme(colours);
106
107	1	assertEquals(g, cs.findColour('A'));
108	1	assertEquals(b, cs.findColour('n'));
109	1	assertEquals(g, cs.findColour('-'));
110	1	assertEquals(g, cs.findColour('.'));
111	1	assertEquals(g, cs.findColour(' '));
112		}
113		}