Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
FeatureMatcherSetI	32	0	0	-1.0 -	Show methods

Class FeatureMatcherSetI

Class FeatureMatcherSetI	Line # 32	Total Statements 0	Complexity 0	TOTAL Coverage -1.0 -

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.datamodel.features;
22
23		import jalview.datamodel.SequenceFeature;
24
25		/**
26		* An interface to describe a set of one or more feature matchers, where all
27		* matchers are combined with either AND or OR
28		*
29		* @author gmcarstairs
30		*
31		*/
		- Uncovered Elements: 0 (0) Complexity: 0 Complexity Density: -
32		public interface FeatureMatcherSetI
33		{
34		/**
35		* Answers true if the feature provided passes this matcher's match condition
36		*
37		* @param feature
38		* @return
39		*/
40		boolean matches(SequenceFeature feature);
41
42		/**
43		* Adds (ANDs) match condition m to this object's matcher set
44		*
45		* @param m
46		* @throws IllegalStateException
47		* if an attempt is made to AND to existing OR-ed conditions
48		*/
49		void and(FeatureMatcherI m);
50
51		/**
52		* Answers true if any second condition is AND-ed with this one, false if it
53		* is OR-ed
54		*
55		* @return
56		*/
57		boolean isAnded();
58
59		/**
60		* Adds (ORs) the given condition to this object's match conditions
61		*
62		* @param m
63		* @throws IllegalStateException
64		* if an attempt is made to OR to existing AND-ed conditions
65		*/
66		void or(FeatureMatcherI m);
67
68		/**
69		* Answers an iterator over the combined match conditions
70		*
71		* @return
72		*/
73		Iterable<FeatureMatcherI> getMatchers();
74
75		/**
76		* Answers true if this object contains no conditions
77		*
78		* @return
79		*/
80		boolean isEmpty();
81
82		/**
83		* Answers a string representation of this object suitable for use when
84		* persisting data, in a format that can be reliably read back. Any changes to
85		* the format should be backwards compatible.
86		*/
87		String toStableString();
88		}