Project Clover database Tue Nov 4 2025 11:21:43 GMT

Package jalview.analysis.scoremodels

Branches:

222

Statements:

451

Methods:

91

Classes:

9

Files:

9

LOC:

2,213

NCLOC:

1,230

Total complexity:

231

Complexity density:

0.51

Statements/Method:

4.96

Methods/Class:

10.11

Average method complexity:

2.54

Package	Files	Average Method Complexity	TOTAL Coverage
jalview.analysis.scoremodels jalview.analysis.scoremodels	9.0 9	2.5384614 2.54	0.78272253 0.7827225378.3%

Class	Methods	Average Method Complexity	TOTAL Coverage
DistanceScoreModel DistanceScoreModel	2.0 2	1.0 1	0.0 0.00%
SmithWatermanModel SmithWatermanModel	7.0 7	1.5714285 1.57	0.0 0.00%
SimilarityParams SimilarityParams	9.0 9	2.2222223 2.22	0.265625 0.26562526.6%
SimilarityScoreModel SimilarityScoreModel	2.0 2	1.0 1	0.5 0.550%
PIDModel PIDModel	12.0 12	2.8333333 2.83	0.71028036 0.7102803671%
FeatureDistanceModel FeatureDistanceModel	10.0 10	2.5 2.5	0.88235295 0.8823529588.2%
SecondaryStructureDistanceModel SecondaryStructureDistanceModel	12.0 12	3.75 3.75	0.8924051 0.892405189.2%
ScoreModels ScoreModels	11.0 11	1.5454545 1.55	0.9230769 0.923076992.3%
ScoreMatrix ScoreMatrix	26.0 26	2.8846154 2.88	0.95564514 0.9556451495.6%