Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
DoubleMatrix	49	11	10	0.9090909490.9%	Show methods

Class DoubleMatrix

Class DoubleMatrix	Line # 49	Total Statements 11	Complexity 10	TOTAL Coverage 0.9090909490.9%
getRow() : List<DoubleVector>   getRow() : List<DoubleVector>	8686	3.03	2.02	1.0 1.0100%
getD() : DoubleVector   getD() : DoubleVector	101101	1.01	1.01	1.0 1.0100%
setD(DoubleVector) : void   setD(DoubleVector) : void	113113	1.01	1.01	1.0 1.0100%
getE() : DoubleVector   getE() : DoubleVector	125125	1.01	1.01	1.0 1.0100%
setE(DoubleVector) : void   setE(DoubleVector) : void	137137	1.01	1.01	1.0 1.0100%
getRows() : Integer   getRows() : Integer	149149	1.01	1.01	1.0 1.0100%
setRows(Integer) : void   setRows(Integer) : void	161161	1.01	1.01	1.0 1.0100%
getColumns() : Integer   getColumns() : Integer	173173	1.01	1.01	0.0 0.00%
setColumns(Integer) : void   setColumns(Integer) : void	185185	1.01	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	0.90909094	jalview.project.Jalview2xmlTests.testPcaViewAssociationjalview.project.Jalview2xmlTests.testPcaViewAssociation	1PASS

 

Source view

1		//
2		// This file was generated by the Eclipse Implementation of JAXB, v2.3.9
3		// See https://eclipse-ee4j.github.io/jaxb-ri
4		// Any modifications to this file will be lost upon recompilation of the source schema.
5		// Generated on: 2025.04.17 at 04:05:44 PM BST
6		//
7
8
9		package jalview.xml.binding.jalview;
10
11		import java.util.ArrayList;
12		import java.util.List;
13		import javax.xml.bind.annotation.XmlAccessType;
14		import javax.xml.bind.annotation.XmlAccessorType;
15		import javax.xml.bind.annotation.XmlAttribute;
16		import javax.xml.bind.annotation.XmlElement;
17		import javax.xml.bind.annotation.XmlType;
18
19
20		/**
21		* <p>Java class for DoubleMatrix complex type</p>.
22		*
23		* <p>The following schema fragment specifies the expected content contained within this class.</p>
24		*
25		* <pre>
26		* &lt;complexType name="DoubleMatrix"&gt;
27		* &lt;complexContent&gt;
28		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
29		* &lt;sequence&gt;
30		* &lt;element name="row" type="{www.jalview.org}DoubleVector" maxOccurs="unbounded" minOccurs="0"/&gt;
31		* &lt;element name="D" type="{www.jalview.org}DoubleVector" minOccurs="0"/&gt;
32		* &lt;element name="E" type="{www.jalview.org}DoubleVector" minOccurs="0"/&gt;
33		* &lt;/sequence&gt;
34		* &lt;attribute name="rows" type="{http://www.w3.org/2001/XMLSchema}int" /&gt;
35		* &lt;attribute name="columns" type="{http://www.w3.org/2001/XMLSchema}int" /&gt;
36		* &lt;/restriction&gt;
37		* &lt;/complexContent&gt;
38		* &lt;/complexType&gt;
39		* </pre>
40		*
41		*
42		*/
43		@XmlAccessorType(XmlAccessType.FIELD)
44		@XmlType(name = "DoubleMatrix", namespace = "www.jalview.org", propOrder = {
45		"row",
46		"d",
47		"e"
48		})
		90.9% Uncovered Elements: 2 (22) Complexity: 10 Complexity Density: 0.91
49		public class DoubleMatrix {
50
51		protected List<DoubleVector> row;
52		@XmlElement(name = "D")
53		protected DoubleVector d;
54		@XmlElement(name = "E")
55		protected DoubleVector e;
56		@XmlAttribute(name = "rows")
57		protected Integer rows;
58		@XmlAttribute(name = "columns")
59		protected Integer columns;
60
61		/**
62		* Gets the value of the row property.
63		*
64		* <p>This accessor method returns a reference to the live list,
65		* not a snapshot. Therefore any modification you make to the
66		* returned list will be present inside the JAXB object.
67		* This is why there is not a <CODE>set</CODE> method for the row property.</p>
68		*
69		* <p>
70		* For example, to add a new item, do as follows:
71		* </p>
72		* <pre>
73		* getRow().add(newItem);
74		* </pre>
75		*
76		*
77		* <p>
78		* Objects of the following type(s) are allowed in the list
79		* {@link DoubleVector }
80		* </p>
81		*
82		*
83		* @return
84		* The value of the row property.
85		*/
		100% Uncovered Elements: 0 (5) Complexity: 2 Complexity Density: 0.67
86	90	public List<DoubleVector> getRow() {...
87	90	if (row == null) {
88	3	row = new ArrayList<DoubleVector>();
89		}
90	90	return this.row;
91		}
92
93		/**
94		* Gets the value of the d property.
95		*
96		* @return
97		* possible object is
98		* {@link DoubleVector }
99		*
100		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
101	5	public DoubleVector getD() {...
102	5	return d;
103		}
104
105		/**
106		* Sets the value of the d property.
107		*
108		* @param value
109		* allowed object is
110		* {@link DoubleVector }
111		*
112		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
113	2	public void setD(DoubleVector value) {...
114	2	this.d = value;
115		}
116
117		/**
118		* Gets the value of the e property.
119		*
120		* @return
121		* possible object is
122		* {@link DoubleVector }
123		*
124		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
125	5	public DoubleVector getE() {...
126	5	return e;
127		}
128
129		/**
130		* Sets the value of the e property.
131		*
132		* @param value
133		* allowed object is
134		* {@link DoubleVector }
135		*
136		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
137	2	public void setE(DoubleVector value) {...
138	2	this.e = value;
139		}
140
141		/**
142		* Gets the value of the rows property.
143		*
144		* @return
145		* possible object is
146		* {@link Integer }
147		*
148		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
149	3	public Integer getRows() {...
150	3	return rows;
151		}
152
153		/**
154		* Sets the value of the rows property.
155		*
156		* @param value
157		* allowed object is
158		* {@link Integer }
159		*
160		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
161	3	public void setRows(Integer value) {...
162	3	this.rows = value;
163		}
164
165		/**
166		* Gets the value of the columns property.
167		*
168		* @return
169		* possible object is
170		* {@link Integer }
171		*
172		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
173	0	public Integer getColumns() {...
174	0	return columns;
175		}
176
177		/**
178		* Sets the value of the columns property.
179		*
180		* @param value
181		* allowed object is
182		* {@link Integer }
183		*
184		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
185	3	public void setColumns(Integer value) {...
186	3	this.columns = value;
187		}
188
189		}