Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
Jws2ParamView	51	46	18	0.0281690142.8%	Show methods

Class Jws2ParamView

Class Jws2ParamView	Line # 51	Total Statements 46	Complexity 18	TOTAL Coverage 0.0281690142.8%
setUpJvOptionPane() : void   setUpJvOptionPane() : void	5454	2.02	1.01	0.0 0.00%
<clinit>, line 70()   <clinit>, line 70()	7070	1.01	1.01	1.0 1.0100%
setUpBeforeClass() : void   setUpBeforeClass() : void	7777	3.03	1.01	0.0 0.00%
windowClosing(WindowEvent) : void   windowClosing(WindowEvent) : void	155155	1.01	1.01	0.0 0.00%
testJws2Gui() : void   testJws2Gui() : void	9090	39.039	14.014	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.ws.gui;
22
23		import java.util.Locale;
24
25		import jalview.bin.Cache;
26		import jalview.bin.Console;
27		import jalview.gui.JvOptionPane;
28		import jalview.gui.WsJobParameters;
29		import jalview.util.MessageManager;
30		import jalview.ws.jabaws.JalviewJabawsTestUtils;
31		import jalview.ws.jws2.JabaPreset;
32		import jalview.ws.jws2.Jws2Discoverer;
33		import jalview.ws.jws2.jabaws2.Jws2Instance;
34
35		import java.awt.BorderLayout;
36		import java.awt.event.WindowAdapter;
37		import java.awt.event.WindowEvent;
38		import java.util.ArrayList;
39		import java.util.Iterator;
40		import java.util.List;
41
42		import javax.swing.JFrame;
43		import javax.swing.JPanel;
44
45		import org.testng.annotations.BeforeClass;
46		import org.testng.annotations.Test;
47
48		import compbio.metadata.Preset;
49		import compbio.metadata.PresetManager;
50
		2.8% Uncovered Elements: 69 (71) Complexity: 18 Complexity Density: 0.39
51		public class Jws2ParamView
52		{
53
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
54	0	@BeforeClass(alwaysRun = true)...
55		public void setUpJvOptionPane()
56		{
57	0	JvOptionPane.setInteractiveMode(false);
58	0	JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
59		}
60
61		/**
62		* which services to test
63		*/
64		public static List<String> serviceTests = new ArrayList<String>();
65
66		/**
67		* which presets to test for services
68		*/
69		public static List<String> presetTests = new ArrayList<String>();
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
70	4	static...
71		{
72	4	serviceTests.add("AAConWS".toLowerCase(Locale.ROOT));
73		}
74
75		public static Jws2Discoverer disc = null;
76
		0% Uncovered Elements: 3 (3) Complexity: 1 Complexity Density: 0.33
77	0	@BeforeClass(alwaysRun = true)...
78		public static void setUpBeforeClass() throws Exception
79		{
80	0	Cache.loadProperties("test/jalview/io/testProps.jvprops");
81	0	Console.initLogger();
82	0	disc = JalviewJabawsTestUtils.getJabawsDiscoverer();
83		}
84
85		/**
86		* This test marked Interactive as it appears to need user action to complete
87		* rather than hang
88		*/
89
		0% Uncovered Elements: 59 (59) Complexity: 14 Complexity Density: 0.36
90	0	@Test(groups = { "Interactive" }, enabled = true)...
91		public void testJws2Gui()
92		{
93	0	Iterator<String> presetEnum = presetTests.iterator();
94	0	for (Jws2Instance service : disc.getServices())
95		{
96	0	if (serviceTests.size() == 0 || serviceTests
97		.contains(service.serviceType.toLowerCase(Locale.ROOT)))
98		{
99	0	List<Preset> prl = null;
100	0	Preset pr = null;
101	0	if (presetEnum.hasNext())
102		{
103	0	PresetManager prman = service.getPresets();
104	0	if (prman != null)
105		{
106	0	pr = prman.getPresetByName(presetEnum.next());
107	0	if (pr == null)
108		{
109		// just grab the last preset.
110	0	prl = prman.getPresets();
111		}
112		}
113		}
114		else
115		{
116	0	PresetManager prman = service.getPresets();
117	0	if (prman != null)
118		{
119	0	prl = prman.getPresets();
120		}
121		}
122	0	Iterator<Preset> en = (prl == null) ? null : prl.iterator();
123	0	while (en != null && en.hasNext())
124		{
125	0	if (en != null)
126		{
127	0	if (!en.hasNext())
128		{
129	0	en = prl.iterator();
130		}
131	0	pr = en.next();
132		}
133	0	WsJobParameters pgui = new WsJobParameters(service,
134		new JabaPreset(service, pr));
135	0	JFrame jf = new JFrame(MessageManager
136		.formatMessage("label.ws_parameters_for", new String[]
137		{ service.getActionText() }));
138	0	jf.setSize(700, 800);
139	0	JPanel cont = new JPanel(new BorderLayout());
140	0	pgui.validate();
141	0	cont.setPreferredSize(pgui.getPreferredSize());
142	0	cont.add(pgui, BorderLayout.CENTER);
143	0	jf.setLayout(new BorderLayout());
144	0	jf.add(cont, BorderLayout.CENTER);
145	0	jf.validate();
146
147	0	final Thread thr = Thread.currentThread();
148
149		/*
150		* This seems to need a user to manually inspect / test / close the
151		* GUI for each service tested. Not standalone JUnit.
152		*/
153	0	jf.addWindowListener(new WindowAdapter()
154		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
155	0	@Override...
156		public void windowClosing(WindowEvent e)
157		{
158	0	thr.interrupt();
159		}
160		});
161	0	jf.setVisible(true);
162	0	boolean inter = false;
163	0	while (!inter)
164		{
165	0	try
166		{
167	0	Thread.sleep(10 * 1000);
168		} catch (InterruptedException e)
169		{
170	0	inter = true;
171		}
172		}
173	0	jf.dispose();
174		}
175		}
176		}
177		}
178		}