Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
GTreePanel	45	93	41	0.5939849659.4%	Show methods

Class GTreePanel

Class GTreePanel	Line # 45	Total Statements 93	Complexity 41	TOTAL Coverage 0.5939849659.4%
GTreePanel()   GTreePanel()	101101	4.04	2.02	0.75 0.7575%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	125125	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	134134	1.01	1.01	0.0 0.00%
menuSelected(MenuEvent) : void   menuSelected(MenuEvent) : void	143143	1.01	1.01	0.0 0.00%
menuDeselected(MenuEvent) : void   menuDeselected(MenuEvent) : void	149149	0.00	1.01	-1.0 -1.0 -
menuCanceled(MenuEvent) : void   menuCanceled(MenuEvent) : void	154154	0.00	1.01	-1.0 -1.0 -
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	163163	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	173173	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	183183	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	193193	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	202202	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	217217	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	227227	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	237237	1.01	1.01	1.0 1.0100%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	249249	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	258258	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	267267	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	280280	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	289289	1.01	1.01	0.0 0.00%
actionPerformed(ActionEvent) : void   actionPerformed(ActionEvent) : void	298298	1.01	1.01	0.0 0.00%
jbInit() : void   jbInit() : void	113113	72.072	1.01	1.0 1.0100%
printMenu_actionPerformed(ActionEvent) : void   printMenu_actionPerformed(ActionEvent) : void	331331	0.00	1.01	-1.0 -1.0 -
font_actionPerformed(ActionEvent) : void   font_actionPerformed(ActionEvent) : void	335335	0.00	1.01	-1.0 -1.0 -
distanceMenu_actionPerformed(ActionEvent) : void   distanceMenu_actionPerformed(ActionEvent) : void	339339	0.00	1.01	-1.0 -1.0 -
showSecondaryStructureProviderMenu_actionPerformed(ActionEvent) : void   showSecondaryStructureProviderMenu_actionPerformed(ActionEvent) : void	343343	0.00	1.01	-1.0 -1.0 -
hideStructureProviders_actionPerformed(ActionEvent) : void   hideStructureProviders_actionPerformed(ActionEvent) : void	347347	0.00	1.01	-1.0 -1.0 -
showStructureProviderColouredLines_actionPerformed(ActionEvent) : void   showStructureProviderColouredLines_actionPerformed(ActionEvent) : void	351351	0.00	1.01	-1.0 -1.0 -
showStructureProviderLabels_actionPerformed(ActionEvent) : void   showStructureProviderLabels_actionPerformed(ActionEvent) : void	355355	0.00	1.01	-1.0 -1.0 -
bootstrapMenu_actionPerformed(ActionEvent) : void   bootstrapMenu_actionPerformed(ActionEvent) : void	359359	0.00	1.01	-1.0 -1.0 -
fitToWindow_actionPerformed(ActionEvent) : void   fitToWindow_actionPerformed(ActionEvent) : void	363363	0.00	1.01	-1.0 -1.0 -
writeTreeImage(TYPE) : void   writeTreeImage(TYPE) : void	367367	0.00	1.01	-1.0 -1.0 -
saveAsNewick_actionPerformed(ActionEvent) : void   saveAsNewick_actionPerformed(ActionEvent) : void	371371	0.00	1.01	-1.0 -1.0 -
placeholdersMenu_actionPerformed(ActionEvent) : void   placeholdersMenu_actionPerformed(ActionEvent) : void	375375	0.00	1.01	-1.0 -1.0 -
textbox_actionPerformed(ActionEvent) : void   textbox_actionPerformed(ActionEvent) : void	379379	0.00	1.01	-1.0 -1.0 -
fullid_actionPerformed(ActionEvent) : void   fullid_actionPerformed(ActionEvent) : void	383383	0.00	1.01	-1.0 -1.0 -
originalSeqData_actionPerformed(ActionEvent) : void   originalSeqData_actionPerformed(ActionEvent) : void	388388	0.00	1.01	-1.0 -1.0 -
viewMenu_menuSelected() : void   viewMenu_menuSelected() : void	393393	0.00	1.01	-1.0 -1.0 -
sortByTree_actionPerformed() : void   sortByTree_actionPerformed() : void	397397	0.00	1.01	-1.0 -1.0 -
sortAnnotationByTree_actionPerformed() : void   sortAnnotationByTree_actionPerformed() : void	401401	0.00	1.01	-1.0 -1.0 -
toggleOffStructureProviderColouredLine_actionPerformed(ActionEvent) : void   toggleOffStructureProviderColouredLine_actionPerformed(ActionEvent) : void	406406	0.00	1.01	-1.0 -1.0 -

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.59398496	jalview.project.Jalview2xmlTests.testSaveAndLoadAnnotationsPropertiesjalview.project.Jalview2xmlTests.testSaveAndLoadAnnotationsProperties	1PASS
	0.59398496	jalview.project.Jalview2xmlTests.testSaveAndLoadAnnotationBasedTreejalview.project.Jalview2xmlTests.testSaveAndLoadAnnotationBasedTree	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.viewRefPdbAnnotationjalview.project.Jalview2xmlTests.viewRefPdbAnnotation	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviewsjalview.project.Jalview2xmlTests.testStoreAndRecoverExpandedviews	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.testCopyViewSettingsjalview.project.Jalview2xmlTests.testCopyViewSettings	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettingsjalview.project.Jalview2xmlTests.testStoreAndRecoverReferenceSeqSettings	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjectsjalview.project.Jalview2xmlTests.testAutoShowOverviewForLegacyProjects	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.gatherViewsHerejalview.project.Jalview2xmlTests.gatherViewsHere	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMadejalview.project.Jalview2xmlTests.noDuplicatePdbMappingsMade	1PASS
	0.57894737	jalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeightjalview.project.Jalview2xmlTests.testStoreAndRestoreIDwidthAndAnnotationHeight	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.jbgui;
22
23		import java.awt.BorderLayout;
24		import java.awt.Color;
25		import java.awt.event.ActionEvent;
26		import java.awt.event.ActionListener;
27		import java.awt.event.MouseAdapter;
28		import java.awt.event.MouseEvent;
29
30		import javax.swing.ButtonGroup;
31		import javax.swing.JCheckBoxMenuItem;
32		import javax.swing.JInternalFrame;
33		import javax.swing.JMenu;
34		import javax.swing.JMenuBar;
35		import javax.swing.JMenuItem;
36		import javax.swing.JRadioButtonMenuItem;
37		import javax.swing.JScrollPane;
38		import javax.swing.event.MenuEvent;
39		import javax.swing.event.MenuListener;
40
41		import jalview.util.ImageMaker.TYPE;
42		import jalview.util.MessageManager;
43
44		@SuppressWarnings("serial")
		59.4% Uncovered Elements: 54 (133) Complexity: 41 Complexity Density: 0.44
45		public class GTreePanel extends JInternalFrame
46		{
47		BorderLayout borderLayout1 = new BorderLayout();
48
49		public JScrollPane scrollPane = new JScrollPane();
50
51		JMenuBar jMenuBar1 = new JMenuBar();
52
53		JMenu fileMenu = new JMenu();
54
55		JMenuItem saveAsNewick = new JMenuItem();
56
57		JMenuItem printMenu = new JMenuItem();
58
59		protected JMenu viewMenu = new JMenu();
60
61		public JMenuItem font = new JMenuItem();
62
63		public JMenuItem sortAssocViews = new JMenuItem();
64
65		public JMenuItem sortAnnotationAssocViews = new JMenuItem();
66
67		public JCheckBoxMenuItem bootstrapMenu = new JCheckBoxMenuItem();
68
69		public JCheckBoxMenuItem distanceMenu = new JCheckBoxMenuItem();
70
71		//Menu option for the user to select their preference in
72		//displaying secondary structure providers as labels.
73		//Visible only for secondary structure similarity.
74
75		public JMenu showSecondaryStructureProviderMenu = new JMenu();
76
77		ButtonGroup showSecondaryStructureProviderButtonGroup = new ButtonGroup();
78
79		public JRadioButtonMenuItem hideStructureProviders = new JRadioButtonMenuItem();
80
81		public JRadioButtonMenuItem showStructureProviderLabels = new JRadioButtonMenuItem();
82
83		public JRadioButtonMenuItem showStructureProviderColouredLines = new JRadioButtonMenuItem();
84
85		public JCheckBoxMenuItem fitToWindow = new JCheckBoxMenuItem();
86
87		public JCheckBoxMenuItem placeholdersMenu = new JCheckBoxMenuItem();
88
89		JMenuItem pngTree = new JMenuItem();
90
91		JMenuItem epsTree = new JMenuItem();
92
93		JMenu saveAsMenu = new JMenu();
94
95		JMenuItem textbox = new JMenuItem();
96
97		public JMenuItem originalSeqData = new JMenuItem();
98
99		protected JMenu associateLeavesMenu = new JMenu();
100
		75% Uncovered Elements: 1 (4) Complexity: 2 Complexity Density: 0.5
101	18	public GTreePanel()...
102		{
103	18	try
104		{
105	18	jbInit();
106	18	this.setJMenuBar(jMenuBar1);
107		} catch (Exception e)
108		{
109	0	e.printStackTrace();
110		}
111		}
112
		100% Uncovered Elements: 0 (72) Complexity: 1 Complexity Density: 0.01
113	18	private void jbInit() throws Exception...
114		{
115	18	setFrameIcon(null);
116	18	setName("jalview-tree");
117	18	this.getContentPane().setLayout(borderLayout1);
118	18	this.setBackground(Color.white);
119	18	this.setFont(new java.awt.Font("Verdana", 0, 12));
120	18	scrollPane.setOpaque(false);
121	18	fileMenu.setText(MessageManager.getString("action.file"));
122	18	saveAsNewick.setText(MessageManager.getString("label.newick_format"));
123	18	saveAsNewick.addActionListener(new ActionListener()
124		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
125	0	@Override...
126		public void actionPerformed(ActionEvent e)
127		{
128	0	saveAsNewick_actionPerformed(e);
129		}
130		});
131	18	printMenu.setText(MessageManager.getString("action.print"));
132	18	printMenu.addActionListener(new java.awt.event.ActionListener()
133		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
134	0	@Override...
135		public void actionPerformed(ActionEvent e)
136		{
137	0	printMenu_actionPerformed(e);
138		}
139		});
140	18	viewMenu.setText(MessageManager.getString("action.view"));
141	18	viewMenu.addMenuListener(new MenuListener()
142		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
143	0	@Override...
144		public void menuSelected(MenuEvent e)
145		{
146	0	viewMenu_menuSelected();
147		}
148
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
149	0	@Override...
150		public void menuDeselected(MenuEvent e)
151		{
152		}
153
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
154	0	@Override...
155		public void menuCanceled(MenuEvent e)
156		{
157		}
158		});
159	18	sortAssocViews.setText(
160		MessageManager.getString("label.sort_alignment_by_tree"));
161	18	sortAssocViews.addActionListener(new java.awt.event.ActionListener()
162		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
163	0	@Override...
164		public void actionPerformed(ActionEvent e)
165		{
166	0	sortByTree_actionPerformed();
167		}
168		});
169	18	sortAnnotationAssocViews.setText(
170		MessageManager.getString("label.sort_annotation_by_tree"));
171	18	sortAnnotationAssocViews.addActionListener(new java.awt.event.ActionListener()
172		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
173	0	@Override...
174		public void actionPerformed(ActionEvent e)
175		{
176	0	sortAnnotationByTree_actionPerformed();
177
178		}
179		});
180	18	font.setText(MessageManager.getString("action.font"));
181	18	font.addActionListener(new java.awt.event.ActionListener()
182		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
183	0	@Override...
184		public void actionPerformed(ActionEvent e)
185		{
186	0	font_actionPerformed(e);
187		}
188		});
189	18	bootstrapMenu.setText(
190		MessageManager.getString("label.show_bootstrap_values"));
191	18	bootstrapMenu.addActionListener(new java.awt.event.ActionListener()
192		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
193	0	@Override...
194		public void actionPerformed(ActionEvent e)
195		{
196	0	bootstrapMenu_actionPerformed(e);
197		}
198		});
199	18	distanceMenu.setText(MessageManager.getString("label.show_distances"));
200	18	distanceMenu.addActionListener(new java.awt.event.ActionListener()
201		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
202	0	@Override...
203		public void actionPerformed(ActionEvent e)
204		{
205	0	distanceMenu_actionPerformed(e);
206		}
207		});
208
209	18	showSecondaryStructureProviderButtonGroup.add(hideStructureProviders);
210	18	showSecondaryStructureProviderButtonGroup.add(showStructureProviderLabels);
211	18	showSecondaryStructureProviderButtonGroup.add(showStructureProviderColouredLines);
212	18	showSecondaryStructureProviderMenu.setText(MessageManager.getString("label.show_secondary_structure_provider"));
213	18	hideStructureProviders.setText(MessageManager.getString("label.hide_structure_provider"));
214	18	hideStructureProviders.setSelected(true);
215	18	hideStructureProviders.addActionListener(new ActionListener()
216		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
217	0	@Override...
218		public void actionPerformed(ActionEvent e)
219		{
220	0	hideStructureProviders_actionPerformed(e);
221		}
222		});
223
224	18	showStructureProviderLabels.setText(MessageManager.getString("label.show_structure_provider_as_labels"));
225	18	showStructureProviderLabels.addActionListener(new ActionListener()
226		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
227	0	@Override...
228		public void actionPerformed(ActionEvent e)
229		{
230	0	showStructureProviderLabels_actionPerformed(e);
231		}
232		});
233
234	18	showStructureProviderColouredLines.setText(MessageManager.getString("label.show_structure_provider_as_coloured_lines"));
235	18	showStructureProviderColouredLines.addActionListener(new java.awt.event.ActionListener()
236		{
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
237	4	@Override...
238		public void actionPerformed(ActionEvent e)
239		{
240	4	showStructureProviderColouredLines_actionPerformed(e);
241		}
242
243		});
244
245	18	fitToWindow.setSelected(true);
246	18	fitToWindow.setText(MessageManager.getString("label.fit_to_window"));
247	18	fitToWindow.addActionListener(new java.awt.event.ActionListener()
248		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
249	0	@Override...
250		public void actionPerformed(ActionEvent e)
251		{
252	0	fitToWindow_actionPerformed(e);
253		}
254		});
255	18	epsTree.setText("EPS");
256	18	epsTree.addActionListener(new java.awt.event.ActionListener()
257		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
258	0	@Override...
259		public void actionPerformed(ActionEvent e)
260		{
261	0	writeTreeImage(TYPE.EPS);
262		}
263		});
264	18	pngTree.setText("PNG");
265	18	pngTree.addActionListener(new java.awt.event.ActionListener()
266		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
267	0	@Override...
268		public void actionPerformed(ActionEvent e)
269		{
270	0	writeTreeImage(TYPE.PNG);
271		}
272		});
273	18	saveAsMenu.setText(MessageManager.getString("action.save_as"));
274	18	placeholdersMenu.setToolTipText(MessageManager.getString(
275		"label.marks_leaves_tree_not_associated_with_sequence"));
276	18	placeholdersMenu.setText(
277		MessageManager.getString("label.mark_unlinked_leaves"));
278	18	placeholdersMenu.addActionListener(new ActionListener()
279		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
280	0	@Override...
281		public void actionPerformed(ActionEvent e)
282		{
283	0	placeholdersMenu_actionPerformed(e);
284		}
285		});
286	18	textbox.setText(MessageManager.getString("label.out_to_textbox"));
287	18	textbox.addActionListener(new ActionListener()
288		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
289	0	@Override...
290		public void actionPerformed(ActionEvent e)
291		{
292	0	textbox_actionPerformed(e);
293		}
294		});
295	18	originalSeqData.setText(MessageManager.getString("label.input_data"));
296	18	originalSeqData.addActionListener(new ActionListener()
297		{
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
298	0	@Override...
299		public void actionPerformed(ActionEvent e)
300		{
301	0	originalSeqData_actionPerformed(e);
302		}
303		});
304	18	associateLeavesMenu.setText(
305		MessageManager.getString("label.associate_leaves_with"));
306	18	this.getContentPane().add(scrollPane, BorderLayout.CENTER);
307	18	jMenuBar1.add(fileMenu);
308	18	jMenuBar1.add(viewMenu);
309	18	fileMenu.add(saveAsMenu);
310	18	fileMenu.add(textbox);
311	18	fileMenu.add(printMenu);
312	18	fileMenu.add(originalSeqData);
313	18	viewMenu.add(fitToWindow);
314	18	viewMenu.add(font);
315	18	viewMenu.add(distanceMenu);
316	18	viewMenu.add(showSecondaryStructureProviderMenu);
317	18	viewMenu.add(bootstrapMenu);
318	18	viewMenu.add(placeholdersMenu);
319	18	viewMenu.add(sortAssocViews);
320	18	viewMenu.add(sortAnnotationAssocViews);
321	18	viewMenu.add(associateLeavesMenu);
322	18	saveAsMenu.add(saveAsNewick);
323	18	saveAsMenu.add(epsTree);
324	18	saveAsMenu.add(pngTree);
325	18	showSecondaryStructureProviderMenu.add(hideStructureProviders);
326	18	showSecondaryStructureProviderMenu.add(showStructureProviderLabels);
327	18	showSecondaryStructureProviderMenu.add(showStructureProviderColouredLines);
328
329		}
330
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
331	0	public void printMenu_actionPerformed(ActionEvent e)...
332		{
333		}
334
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
335	0	public void font_actionPerformed(ActionEvent e)...
336		{
337		}
338
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
339	0	public void distanceMenu_actionPerformed(ActionEvent e)...
340		{
341		}
342
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
343	0	public void showSecondaryStructureProviderMenu_actionPerformed(ActionEvent e)...
344		{
345		}
346
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
347	0	public void hideStructureProviders_actionPerformed(ActionEvent e)...
348		{
349		}
350
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
351	0	public void showStructureProviderColouredLines_actionPerformed(ActionEvent e)...
352		{
353		}
354
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
355	0	public void showStructureProviderLabels_actionPerformed(ActionEvent e)...
356		{
357		}
358
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
359	0	public void bootstrapMenu_actionPerformed(ActionEvent e)...
360		{
361		}
362
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
363	0	public void fitToWindow_actionPerformed(ActionEvent e)...
364		{
365		}
366
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
367	0	public void writeTreeImage(TYPE imageType)...
368		{
369		}
370
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
371	0	public void saveAsNewick_actionPerformed(ActionEvent e)...
372		{
373		}
374
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
375	0	public void placeholdersMenu_actionPerformed(ActionEvent e)...
376		{
377		}
378
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
379	0	public void textbox_actionPerformed(ActionEvent e)...
380		{
381		}
382
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
383	0	public void fullid_actionPerformed(ActionEvent e)...
384		{
385
386		}
387
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
388	0	public void originalSeqData_actionPerformed(ActionEvent e)...
389		{
390
391		}
392
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
393	0	public void viewMenu_menuSelected()...
394		{
395		}
396
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
397	0	public void sortByTree_actionPerformed()...
398		{
399
400		}
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
401	0	public void sortAnnotationByTree_actionPerformed()...
402		{
403
404		}
405
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
406	0	public void toggleOffStructureProviderColouredLine_actionPerformed(...
407		ActionEvent e)
408		{
409		// TODO Auto-generated method stub
410
411		}
412
413		}