Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
FeatureMatcherSet	58	4	4	1.0100%	Show methods
FeatureMatcherSet.CompoundMatcher	138	5	4	1.0100%	Show methods

Class FeatureMatcherSet

Class FeatureMatcherSet	Line # 58	Total Statements 4	Complexity 4	TOTAL Coverage 1.0100%
getMatchCondition() : FeatureMatcher   getMatchCondition() : FeatureMatcher	7373	1.01	1.01	1.0 1.0100%
setMatchCondition(FeatureMatcher) : void   setMatchCondition(FeatureMatcher) : void	8585	1.01	1.01	1.0 1.0100%
getCompoundMatcher() : FeatureMatcherSet.CompoundMatcher   getCompoundMatcher() : FeatureMatcherSet.CompoundMatcher	9797	1.01	1.01	1.0 1.0100%
setCompoundMatcher(FeatureMatcherSet.CompoundMatcher) : void   setCompoundMatcher(FeatureMatcherSet.CompoundMatcher) : void	109109	1.01	1.01	1.0 1.0100%

 

Class FeatureMatcherSet.CompoundMatcher

Class FeatureMatcherSet.CompoundMatcher	Line # 138	Total Statements 5	Complexity 4	TOTAL Coverage 1.0100%
getMatcherSet() : List<FeatureMatcherSet>   getMatcherSet() : List<FeatureMatcherSet>	174174	3.03	2.02	1.0 1.0100%
isAnd() : boolean   isAnd() : boolean	185185	1.01	1.01	1.0 1.0100%
setAnd(boolean) : void   setAnd(boolean) : void	193193	1.01	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	1.0	jalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFiltersjalview.project.Jalview2xmlTests.testSaveLoadFeatureColoursAndFilters	1PASS
	1.0	jalview.gui.FeatureSettingsTest.testSaveLoadjalview.gui.FeatureSettingsTest.testSaveLoad	1PASS

 

Source view

1		//
2		// This file was generated by the Eclipse Implementation of JAXB, v2.3.9
3		// See https://eclipse-ee4j.github.io/jaxb-ri
4		// Any modifications to this file will be lost upon recompilation of the source schema.
5		// Generated on: 2025.04.17 at 04:05:44 PM BST
6		//
7
8
9		package jalview.xml.binding.jalview;
10
11		import java.util.ArrayList;
12		import java.util.List;
13		import javax.xml.bind.annotation.XmlAccessType;
14		import javax.xml.bind.annotation.XmlAccessorType;
15		import javax.xml.bind.annotation.XmlAttribute;
16		import javax.xml.bind.annotation.XmlElement;
17		import javax.xml.bind.annotation.XmlType;
18
19
20		/**
21		* A feature match condition, which may be simple or compound
22		*
23		* <p>Java class for FeatureMatcherSet complex type</p>.
24		*
25		* <p>The following schema fragment specifies the expected content contained within this class.</p>
26		*
27		* <pre>
28		* &lt;complexType name="FeatureMatcherSet"&gt;
29		* &lt;complexContent&gt;
30		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
31		* &lt;choice&gt;
32		* &lt;element name="matchCondition" type="{www.jalview.org/colours}FeatureMatcher"/&gt;
33		* &lt;element name="compoundMatcher"&gt;
34		* &lt;complexType&gt;
35		* &lt;complexContent&gt;
36		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
37		* &lt;sequence&gt;
38		* &lt;element name="matcherSet" type="{www.jalview.org/colours}FeatureMatcherSet" maxOccurs="2" minOccurs="2"/&gt;
39		* &lt;/sequence&gt;
40		* &lt;attribute name="and" use="required" type="{http://www.w3.org/2001/XMLSchema}boolean" /&gt;
41		* &lt;/restriction&gt;
42		* &lt;/complexContent&gt;
43		* &lt;/complexType&gt;
44		* &lt;/element&gt;
45		* &lt;/choice&gt;
46		* &lt;/restriction&gt;
47		* &lt;/complexContent&gt;
48		* &lt;/complexType&gt;
49		* </pre>
50		*
51		*
52		*/
53		@XmlAccessorType(XmlAccessType.FIELD)
54		@XmlType(name = "FeatureMatcherSet", namespace = "www.jalview.org/colours", propOrder = {
55		"matchCondition",
56		"compoundMatcher"
57		})
		100% Uncovered Elements: 0 (8) Complexity: 4 Complexity Density: 1
58		public class FeatureMatcherSet {
59
60		@XmlElement(namespace = "")
61		protected FeatureMatcher matchCondition;
62		@XmlElement(namespace = "")
63		protected FeatureMatcherSet.CompoundMatcher compoundMatcher;
64
65		/**
66		* Gets the value of the matchCondition property.
67		*
68		* @return
69		* possible object is
70		* {@link FeatureMatcher }
71		*
72		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
73	14	public FeatureMatcher getMatchCondition() {...
74	14	return matchCondition;
75		}
76
77		/**
78		* Sets the value of the matchCondition property.
79		*
80		* @param value
81		* allowed object is
82		* {@link FeatureMatcher }
83		*
84		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
85	10	public void setMatchCondition(FeatureMatcher value) {...
86	10	this.matchCondition = value;
87		}
88
89		/**
90		* Gets the value of the compoundMatcher property.
91		*
92		* @return
93		* possible object is
94		* {@link FeatureMatcherSet.CompoundMatcher }
95		*
96		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
97	8	public FeatureMatcherSet.CompoundMatcher getCompoundMatcher() {...
98	8	return compoundMatcher;
99		}
100
101		/**
102		* Sets the value of the compoundMatcher property.
103		*
104		* @param value
105		* allowed object is
106		* {@link FeatureMatcherSet.CompoundMatcher }
107		*
108		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
109	4	public void setCompoundMatcher(FeatureMatcherSet.CompoundMatcher value) {...
110	4	this.compoundMatcher = value;
111		}
112
113
114		/**
115		* <p>Java class for anonymous complex type</p>.
116		*
117		* <p>The following schema fragment specifies the expected content contained within this class.</p>
118		*
119		* <pre>
120		* &lt;complexType&gt;
121		* &lt;complexContent&gt;
122		* &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt;
123		* &lt;sequence&gt;
124		* &lt;element name="matcherSet" type="{www.jalview.org/colours}FeatureMatcherSet" maxOccurs="2" minOccurs="2"/&gt;
125		* &lt;/sequence&gt;
126		* &lt;attribute name="and" use="required" type="{http://www.w3.org/2001/XMLSchema}boolean" /&gt;
127		* &lt;/restriction&gt;
128		* &lt;/complexContent&gt;
129		* &lt;/complexType&gt;
130		* </pre>
131		*
132		*
133		*/
134		@XmlAccessorType(XmlAccessType.FIELD)
135		@XmlType(name = "", propOrder = {
136		"matcherSet"
137		})
		100% Uncovered Elements: 0 (10) Complexity: 4 Complexity Density: 0.8
138		public static class CompoundMatcher {
139
140		@XmlElement(namespace = "", required = true)
141		protected List<FeatureMatcherSet> matcherSet;
142		/**
143		* If true, matchers are AND-ed, if false they are OR-ed
144		*
145		*/
146		@XmlAttribute(name = "and", required = true)
147		protected boolean and;
148
149		/**
150		* Gets the value of the matcherSet property.
151		*
152		* <p>This accessor method returns a reference to the live list,
153		* not a snapshot. Therefore any modification you make to the
154		* returned list will be present inside the JAXB object.
155		* This is why there is not a <CODE>set</CODE> method for the matcherSet property.</p>
156		*
157		* <p>
158		* For example, to add a new item, do as follows:
159		* </p>
160		* <pre>
161		* getMatcherSet().add(newItem);
162		* </pre>
163		*
164		*
165		* <p>
166		* Objects of the following type(s) are allowed in the list
167		* {@link FeatureMatcherSet }
168		* </p>
169		*
170		*
171		* @return
172		* The value of the matcherSet property.
173		*/
		100% Uncovered Elements: 0 (5) Complexity: 2 Complexity Density: 0.67
174	12	public List<FeatureMatcherSet> getMatcherSet() {...
175	12	if (matcherSet == null) {
176	4	matcherSet = new ArrayList<FeatureMatcherSet>();
177		}
178	12	return this.matcherSet;
179		}
180
181		/**
182		* If true, matchers are AND-ed, if false they are OR-ed
183		*
184		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
185	4	public boolean isAnd() {...
186	4	return and;
187		}
188
189		/**
190		* Sets the value of the and property.
191		*
192		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
193	4	public void setAnd(boolean value) {...
194	4	this.and = value;
195		}
196
197		}
198
199		}