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Coverage Report

  1. Project Clover database Thu Nov 28 2024 18:06:40 GMT
  2. Package ext.edu.ucsf.rbvi.strucviz2

File StructureSettings.java

 

Coverage histogram

../../../../../img/srcFileCovDistChart0.png
63% of files have more coverage

Code metrics

0
3
2
1
62
14
2
0.67
1.5
2
1

Classes

Class Line # Actions
StructureSettings 39 3 2
0.00%
 

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No tests hitting this source file were found.

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1    /* vim: set ts=2: */
2    /**
3    * Copyright (c) 2006 The Regents of the University of California.
4    * All rights reserved.
5    *
6    * Redistribution and use in source and binary forms, with or without
7    * modification, are permitted provided that the following conditions
8    * are met:
9    * 1. Redistributions of source code must retain the above copyright
10    * notice, this list of conditions, and the following disclaimer.
11    * 2. Redistributions in binary form must reproduce the above
12    * copyright notice, this list of conditions, and the following
13    * disclaimer in the documentation and/or other materials provided
14    * with the distribution.
15    * 3. Redistributions must acknowledge that this software was
16    * originally developed by the UCSF Computer Graphics Laboratory
17    * under support by the NIH National Center for Research Resources,
18    * grant P41-RR01081.
19    *
20    * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDER "AS IS" AND ANY
21    * EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
22    * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
23    * PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS BE LIABLE
24    * FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
25    * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT
26    * OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
27    * BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
28    * WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
29    * OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE,
30    * EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
31    *
32    */
33    package ext.edu.ucsf.rbvi.strucviz2;
34   
35    /**
36    * This object maintains the relationship between Chimera objects and Cytoscape
37    * objects.
38    */
 
39    public class StructureSettings
40    {
41   
42    // @Tunable(description = "Path to UCSF Chimera application", gravity = 4.0)
43    public String chimeraPath = null;
44   
 
45  0 toggle public StructureSettings(StructureManager manager)
46    {
47   
48  0 chimeraPath = manager.getCurrentChimeraPath(null);
49   
50    // This seems a little strange, but it has to do with the order of tunable
51    // interceptor
52    // handling. We need to set these selectors in our structure manager and
53    // dynamically
54    // pull the data out as needed....
55  0 manager.setStructureSettings(this);
56    }
57   
 
58  0 toggle public String getChimeraPath()
59    {
60  0 return chimeraPath;
61    }
62    }