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Coverage Report

Test testSeqAssociatedPAEMatrix

Test
testSeqAssociatedPAEMatrix 1PASS 28 Nov 11:47:27 0.003
 
testSeqAssociatedPAEMatrix
com.stevesoft.pat.Rthings   com.stevesoft.pat.Rthings 0.8461538684.6%
jalview.analysis.AverageDistanceEngine   jalview.analysis.AverageDistanceEngine 0.8461538684.6%
jalview.analysis.TreeEngine   jalview.analysis.TreeEngine 0.7428571674.3%
jalview.datamodel.ContactMapHolder   jalview.datamodel.ContactMapHolder 0.7115384371.2%
jalview.datamodel.FloatContactMatrix   jalview.datamodel.FloatContactMatrix 0.6666%
com.stevesoft.pat.oneChar   com.stevesoft.pat.oneChar 0.657142965.7%
com.stevesoft.pat.Bracket   com.stevesoft.pat.Bracket 0.6565%
com.stevesoft.pat.wrap.StringWrap   com.stevesoft.pat.wrap.StringWrap 0.62562.5%
com.stevesoft.pat.StrPos   com.stevesoft.pat.StrPos 0.5930232459.3%
jalview.ws.datamodel.alphafold.MappableContactMatrix   jalview.ws.datamodel.alphafold.MappableContactMatrix 0.5355648453.6%
com.stevesoft.pat.FastChar   com.stevesoft.pat.FastChar 0.550%
jalview.datamodel.GroupSetHolder   jalview.datamodel.GroupSetHolder 0.550%
com.stevesoft.pat.parsePerl   com.stevesoft.pat.parsePerl 0.448979644.9%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 0.4285714342.9%
com.stevesoft.pat.Range   com.stevesoft.pat.Range 0.3863636338.6%
com.stevesoft.pat.Pattern   com.stevesoft.pat.Pattern 0.3680555536.8%
com.stevesoft.pat.Or   com.stevesoft.pat.Or 0.3205128332.1%
com.stevesoft.pat.OrMark   com.stevesoft.pat.OrMark 0.330%
jalview.util.Comparison   jalview.util.Comparison 0.299212629.9%
jalview.datamodel.GroupSet   jalview.datamodel.GroupSet 0.2931034629.3%
jalview.datamodel.BinaryNode   jalview.datamodel.BinaryNode 0.2916666629.2%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.285714328.6%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.2759515627.6%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.272527.3%
com.stevesoft.pat.NullPattern   com.stevesoft.pat.NullPattern 0.2525%
com.stevesoft.pat.StringRule   com.stevesoft.pat.StringRule 0.2525%
com.stevesoft.pat.Regex   com.stevesoft.pat.Regex 0.2463636424.6%
jalview.datamodel.SequenceCursor   jalview.datamodel.SequenceCursor 0.2333333323.3%
jalview.util.MapList   jalview.util.MapList 0.1713395617.1%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.1616%
jalview.ws.datamodel.alphafold.PAEContactMatrix   jalview.ws.datamodel.alphafold.PAEContactMatrix 0.1504424815%
com.stevesoft.pat.Branch   com.stevesoft.pat.Branch 0.140939614.1%
com.stevesoft.pat.patInt   com.stevesoft.pat.patInt 0.137513.8%
jalview.io.NewickFile   jalview.io.NewickFile 0.1270207912.7%
com.stevesoft.pat.FastMulti   com.stevesoft.pat.FastMulti 0.1203703712%
com.stevesoft.pat.RegRes   com.stevesoft.pat.RegRes 0.1086956510.9%
jalview.datamodel.ContactListImpl   jalview.datamodel.ContactListImpl 0.1016949110.2%
com.stevesoft.pat.Replacer   com.stevesoft.pat.Replacer 0.091891899.2%
jalview.log.JLogger   jalview.log.JLogger 0.087912098.8%
com.stevesoft.pat.ReplaceRule   com.stevesoft.pat.ReplaceRule 0.08771938.8%
jalview.datamodel.Mapping   jalview.datamodel.Mapping 0.0779220767.8%
jalview.bin.Console   jalview.bin.Console 0.068965526.9%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.061224496.1%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.0512820525.1%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.0418994434.2%
jalview.ws.jws2.JabaWsServerQuery   jalview.ws.jws2.JabaWsServerQuery 0.0416666684.2%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.0310559013.1%
jalview.util.MappingUtils   jalview.util.MappingUtils 0.0237068962.4%
jalview.gui.Console   jalview.gui.Console 0.0206422022.1%
jalview.math.Matrix   jalview.math.Matrix 0.0196078442%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.0156251.6%
jalview.analysis.AlignmentUtils   jalview.analysis.AlignmentUtils 0.0131578951.3%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.0127388541.3%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.0118237191.2%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.009132420.9%
com.stevesoft.pat.CaseMgr   com.stevesoft.pat.CaseMgr 0.00278551530.3%
jalview.io.FileParse   jalview.io.FileParse 0.00278551530.3%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.00235849060.2%