Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
JobStateSummary	32	48	18	0.3827160638.3%	Show methods

Class JobStateSummary

Class JobStateSummary	Line # 32	Total Statements 48	Complexity 18	TOTAL Coverage 0.3827160638.3%
updateJobPanelState(WebserviceInfo,String,AWsJob) : void   updateJobPanelState(WebserviceInfo,String,AWsJob) : void	7777	48.048	18.018	0.375 0.37537.5%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	0.38271606	jalview.gui.AssociatePDBFileTest.testAssociatePDBFilejalview.gui.AssociatePDBFileTest.testAssociatePDBFile	1PASS

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.ws;
22
23		import jalview.gui.WebserviceInfo;
24
25		/**
26		* bookkeeper class for the WebServiceInfo GUI, maintaining records of web
27		* service jobs handled by the window and reflecting any status updates.
28		*
29		* @author JimP
30		*
31		*/
		38.3% Uncovered Elements: 50 (81) Complexity: 18 Complexity Density: 0.38
32		public class JobStateSummary
33		{
34		/**
35		* number of jobs running
36		*/
37		int running = 0;
38
39		/**
40		* number of jobs queued
41		*/
42		int queuing = 0;
43
44		/**
45		* number of jobs finished
46		*/
47		int finished = 0;
48
49		/**
50		* number of jobs failed
51		*/
52		int error = 0;
53
54		/**
55		* number of jobs stopped due to server error
56		*/
57		int serror = 0;
58
59		/**
60		* number of jobs cancelled
61		*/
62		int cancelled = 0;
63
64		/**
65		* number of jobs finished with results
66		*/
67		int results = 0;
68
69		/**
70		* processes an AWSJob's status and updates job status counters and WebService
71		* status displays
72		*
73		* @param wsInfo
74		* @param OutputHeader
75		* @param j
76		*/
		37.5% Uncovered Elements: 50 (80) Complexity: 18 Complexity Density: 0.38
77	1	public void updateJobPanelState(WebserviceInfo wsInfo,...
78		String OutputHeader, AWsJob j)
79		{
80	1	if (j.cancelled)
81		{
82	0	cancelled++;
83	0	j.subjobComplete = true;
84	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_CANCELLED_OK);
85	0	return;
86		}
87	1	if (j.submitted)
88		{
89	1	String progheader = "";
90		// Parse state of job[j]
91	1	if (j.isRunning())
92		{
93	0	running++;
94	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_RUNNING);
95		}
96	1	else if (j.isQueued())
97		{
98	0	queuing++;
99	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_QUEUING);
100		}
101	1	else if (j.isFinished())
102		{
103	0	finished++;
104	0	j.subjobComplete = true;
105	0	if (j.hasResults())
106		{
107	0	results++;
108		}
109	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_STOPPED_OK);
110		}
111	1	else if (j.isFailed())
112		{
113	0	progheader += "Job failed.\n";
114	0	j.subjobComplete = true;
115	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_STOPPED_ERROR);
116	0	error++;
117		}
118	1	else if (j.isServerError())
119		{
120	0	serror++;
121	0	j.subjobComplete = true;
122	0	wsInfo.setStatus(j.jobnum,
123		WebserviceInfo.STATE_STOPPED_SERVERERROR);
124		}
125	1	else if (j.isBroken())
126		{
127	0	progheader += "Job was broken.\n";
128	0	error++;
129	0	j.subjobComplete = true;
130	0	wsInfo.setStatus(j.jobnum, WebserviceInfo.STATE_STOPPED_ERROR);
131		}
132		// and pass on any sub-job messages to the user
133	1	StringBuffer output = new StringBuffer();
134	1	if (OutputHeader != null)
135		{
136
137	0	output.append(OutputHeader);
138		}
139	1	if (progheader != null)
140		{
141	1	output.append(progheader);
142		}
143	1	if (j.hasStatus())
144		{
145		// Could try to squash OOMs here, but it usually doesn't help - there
146		// probably won't be
147		// enough memory to handle the results later on anyway.
148		// try {
149	1	String stat = j.getStatus();
150	1	if (stat != null)
151		{
152	1	output.append(stat);
153		}
154		// } catch (OutOfMemoryError e)
155		// {
156		// jalview.bin.Console.errPrintln("Out of memory when displaying status.
157		// Squashing
158		// error.");
159		// wsInfo.appendProgressText(j.jobnum,
160		// "..\n(Out of memory when displaying status)\n");
161		// }
162		}
163	1	wsInfo.setProgressText(j.jobnum, output.toString());
164		}
165		else
166		{
167	0	if (j.submitted && j.subjobComplete)
168		{
169	0	if (j.allowedServerExceptions == 0)
170		{
171	0	serror++;
172		}
173	0	else if (!j.hasResults())
174		{
175	0	error++;
176		}
177		}
178		}
179		}
180		}