Package	Files	Average Method Complexity	TOTAL Coverage
jalview.workers jalview.workers	13.0 13	3.011628 3.01	0.40970653 0.4097065341%

Class	Methods	Average Method Complexity	TOTAL Coverage
AlignmentAnnotationFactory AlignmentAnnotationFactory	5.0 5	1.4 1.4	0.0 0.00%
AlignmentComparisonThread AlignmentComparisonThread	5.0 5	6.0 6	0.0 0.00%
AnnotationWorker AnnotationWorker	4.0 4	3.0 3	0.0 0.00%
ColumnCounterSetWorker ColumnCounterSetWorker	6.0 6	4.6666665 4.67	0.0 0.00%
StrucConsensusThread StrucConsensusThread	4.0 4	6.25 6.25	0.0 0.00%
AlignCalcWorker AlignCalcWorker	6.0 6	1.8333334 1.83	0.30952382 0.3095238231%
AlignCalcManager AlignCalcManager	18.0 18	2.0 2	0.63095236 0.6309523663.1%
ConservationThread ConservationThread	4.0 4	6.25 6.25	0.7 0.770%
ConsensusThread ConsensusThread	13.0 13	2.5384614 2.54	0.74747473 0.7474747374.7%
SecondaryStructureConsensusThread SecondaryStructureConsensusThread	15.0 15	2.6666667 2.67	0.7794118 0.779411877.9%
ComplementConsensusThread ComplementConsensusThread	6.0 6	2.0 2	0.9166667 0.916666791.7%