Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
SequenceStructureBindingModel	25	4	4	0.7575%	Show methods

Class SequenceStructureBindingModel

Class SequenceStructureBindingModel	Line # 25	Total Statements 4	Complexity 4	TOTAL Coverage 0.7575%
setLoadingFromArchive(boolean) : void   setLoadingFromArchive(boolean) : void	4343	1.01	1.01	1.0 1.0100%
isLoadingFromArchive() : boolean   isLoadingFromArchive() : boolean	5454	1.01	1.01	1.0 1.0100%
isLoadingFinished() : boolean   isLoadingFinished() : boolean	6060	1.01	1.01	1.0 1.0100%
setFinishedLoadingFromArchive(boolean) : void   setFinishedLoadingFromArchive(boolean) : void	6666	1.01	1.01	0.0 0.00%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.75	jalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testAddStrToSingleSeqViewJMol	1PASS
	0.75	jalview.gui.StructureChooserTest.openStructureFileForSequenceTestjalview.gui.StructureChooserTest.openStructureFileForSequenceTest	1PASS
	0.5	jalview.gui.StructureChooserTest.populateFilterComboBoxTestjalview.gui.StructureChooserTest.populateFilterComboBoxTest	1PASS
	0.5	jalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMoljalview.ext.jmol.JmolViewerTest.testSingleSeqViewJMol	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.structures.models;
22
23		import jalview.api.SequenceStructureBinding;
24
		75% Uncovered Elements: 2 (8) Complexity: 4 Complexity Density: 1
25		public class SequenceStructureBindingModel
26		implements SequenceStructureBinding
27		{
28
29		/**
30		* set if Structure Viewer state is being restored from some source -
31		* instructs binding not to apply default display style when structure set is
32		* updated for first time.
33		*/
34		private boolean loadingFromArchive = false;
35
36		/**
37		* second flag to indicate if the Structure viewer should ignore sequence
38		* colouring events from the structure manager because the GUI is still
39		* setting up
40		*/
41		private boolean loadingFinished = true;
42
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
43	3	@Override...
44		public void setLoadingFromArchive(boolean loadingFromArchive)
45		{
46	3	this.loadingFromArchive = loadingFromArchive;
47		}
48
49		/**
50		*
51		* @return true if viewer is still restoring state or loading is still going
52		* on (see setFinishedLoadingFromArchive)
53		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
54	20	@Override...
55		public boolean isLoadingFromArchive()
56		{
57	20	return loadingFromArchive && !loadingFinished;
58		}
59
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
60	13	@Override...
61		public boolean isLoadingFinished()
62		{
63	13	return loadingFinished;
64		}
65
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
66	0	@Override...
67		public void setFinishedLoadingFromArchive(boolean finishedLoading)
68		{
69	0	loadingFinished = finishedLoading;
70		}
71
72		}