Coverage Report
File AlignmentExportData.java
Coverage histogram
21% of files have more coverage
Classes
| Class | Line # | Actions | |||
|---|---|---|---|---|---|
| AlignmentExportData | 23 | 9 | 7 |
Contributing tests
This file is covered by 12 tests.
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Source view
| 1 | /* | |
| 2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
| 3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
| 4 | * | |
| 5 | * This file is part of Jalview. | |
| 6 | * | |
| 7 | * Jalview is free software: you can redistribute it and/or | |
| 8 | * modify it under the terms of the GNU General Public License | |
| 9 | * as published by the Free Software Foundation, either version 3 | |
| 10 | * of the License, or (at your option) any later version. | |
| 11 | * | |
| 12 | * Jalview is distributed in the hope that it will be useful, but | |
| 13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
| 14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
| 15 | * PURPOSE. See the GNU General Public License for more details. | |
| 16 | * | |
| 17 | * You should have received a copy of the GNU General Public License | |
| 18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
| 19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
| 20 | */ | |
| 21 | package jalview.datamodel; | |
| 22 | ||
| 23 | public class AlignmentExportData | |
| 24 | { | |
| 25 | private AlignmentI alignment; | |
| 26 | ||
| 27 | private String[] omitHidden; | |
| 28 | ||
| 29 | private int[] startEnd; | |
| 30 | ||
| 31 | 56 |  public AlignmentExportData(AlignmentI align, String[] ommit, |
| 32 | int[] startEnd) | |
| 33 | { | |
| 34 | 56 | this.alignment = align; |
| 35 | 56 | this.omitHidden = ommit; |
| 36 | 56 | this.startEnd = startEnd; |
| 37 | } | |
| 38 | ||
| 39 | 56 | public AlignmentI getAlignment() |
| 40 | { | |
| 41 | 56 | return alignment; |
| 42 | } | |
| 43 | ||
| 44 | 0 | public void setAlignment(AlignmentI alignment) |
| 45 | { | |
| 46 | 0 | this.alignment = alignment; |
| 47 | } | |
| 48 | ||
| 49 | 56 | public String[] getOmitHidden() |
| 50 | { | |
| 51 | 56 | return omitHidden; |
| 52 | } | |
| 53 | ||
| 54 | 0 | public void setOmitHidden(String[] omitHidden) |
| 55 | { | |
| 56 | 0 | this.omitHidden = omitHidden; |
| 57 | } | |
| 58 | ||
| 59 | 56 | public int[] getStartEndPostions() |
| 60 | { | |
| 61 | 56 | return startEnd; |
| 62 | } | |
| 63 | ||
| 64 | 0 | public void setStartEndPostions(int[] startEnd) |
| 65 | { | |
| 66 | 0 | this.startEnd = startEnd; |
| 67 | } | |
| 68 | } |