Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
TurnColourSchemeTest	29	8	1	1.0100%	Show methods

Class TurnColourSchemeTest

Class TurnColourSchemeTest	Line # 29	Total Statements 8	Complexity 1	TOTAL Coverage 1.0100%
testFindColour() : void   testFindColour() : void	3737	8.08	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	1.0	jalview.schemes.TurnColourSchemeTest.testFindColourjalview.schemes.TurnColourSchemeTest.testFindColour	1PASS

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.schemes;
22
23		import static org.testng.Assert.assertEquals;
24
25		import java.awt.Color;
26
27		import org.testng.annotations.Test;
28
		100% Uncovered Elements: 0 (9) Complexity: 1 Complexity Density: 0.12
29		public class TurnColourSchemeTest
30		{
31		/**
32		* Turn colours are based on the scores in ResidueProperties.turn A = 0.66, R
33		* = 0.95, N = 1.56, D = 1.46... min = 0.47 max = 1.56
34		* <p>
35		* scores are scaled to c 0-1 between min and max and colour is (c, 1-c, 1-c)
36		*/
		100% Uncovered Elements: 0 (8) Complexity: 1 Complexity Density: 0.12 1PASS
37	1	@Test(groups = "Functional")...
38		public void testFindColour()
39		{
40	1	ScoreColourScheme scheme = new TurnColourScheme();
41
42	1	float min = 0.47f;
43	1	float max = 1.56f;
44	1	float a = (0.66f - min) / (max - min);
45	1	assertEquals(scheme.findColour('A', 0, null),
46		new Color(a, 1 - a, 1 - a));
47
48	1	float d = (1.46f - min) / (max - min);
49	1	assertEquals(scheme.findColour('D', 0, null),
50		new Color(d, 1 - d, 1 - d));
51
52	1	assertEquals(scheme.findColour('-', 0, null), Color.WHITE);
53		}
54
55		}