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  1. Project Clover database Wed Nov 13 2024 16:12:26 GMT
  2. Package jalview.ext.pymol

File PymolManagerTest.java

 

Code metrics

0
19
2
1
90
48
2
0.11
9.5
2
1

Classes

Class Line # Actions
PymolManagerTest 32 19 2
1.0100%
 

Contributing tests

This file is covered by 2 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.ext.pymol;
22   
23    import static org.testng.Assert.assertEquals;
24    import static org.testng.Assert.assertTrue;
25   
26    import java.util.List;
27   
28    import org.testng.annotations.Test;
29   
30    import jalview.structure.StructureCommand;
31   
 
32    public class PymolManagerTest
33    {
 
34  1 toggle @Test(groups = "Functional")
35    public void testGetPostRequest()
36    {
37  1 String req = PymolManager
38    .getPostRequest(new StructureCommand("foobar"));
39  1 assertEquals(req,
40    "<methodCall><methodName>foobar</methodName><params></params></methodCall>");
41   
42  1 req = PymolManager
43    .getPostRequest(new StructureCommand("foobar", "blue", "all"));
44  1 assertEquals(req,
45    "<methodCall><methodName>foobar</methodName><params>"
46    + "<parameter><value>blue</value></parameter>"
47    + "<parameter><value>all</value></parameter>"
48    + "</params></methodCall>");
49    }
50   
 
51  1 toggle @Test(groups = "Functional")
52    public void testGetPymolPaths()
53    {
54    /*
55    * OSX
56    */
57  1 List<String> paths = PymolManager.getPymolPaths("Mac OS X");
58  1 assertEquals(paths.size(), 1);
59  1 assertTrue(
60    paths.contains("/Applications/PyMOL.app/Contents/MacOS/PyMOL"));
61   
62    /*
63    * Linux
64    */
65  1 paths = PymolManager.getPymolPaths("Linux i386 1.5.0");
66  1 assertTrue(paths.contains("/usr/local/pymol/bin/PyMOL"));
67  1 assertTrue(paths.contains("/usr/local/bin/PyMOL"));
68  1 assertTrue(paths.contains("/usr/bin/PyMOL"));
69  1 assertTrue(paths.contains("/usr/local/pymol/bin/PyMOL"));
70  1 assertTrue(paths
71    .contains(System.getProperty("user.home") + "/opt/bin/PyMOL"));
72   
73    /*
74    * Windows
75    */
76  1 paths = PymolManager.getPymolPaths("Windows 10");
77  1 assertTrue(paths.contains(System.getProperty("user.home")
78    + "\\AppData\\Local\\Schrodinger\\PyMOL2\\PyMOLWinWithConsole.bat"));
79  1 assertTrue(paths.contains(System.getProperty("user.home")
80    + "\\PyMOL\\PyMOLWinWithConsole.bat"));
81  1 assertTrue(paths
82    .contains("C:\\ProgramData\\PyMOL\\PyMOLWinWithConsole.bat"));
83   
84    /*
85    * Other
86    */
87  1 paths = PymolManager.getPymolPaths("VAX/VMS");
88  1 assertTrue(paths.isEmpty());
89    }
90    }