Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
AWsJob	28	13	13	0.4230769342.3%	Show methods

Class AWsJob

Class AWsJob	Line # 28	Total Statements 13	Complexity 13	TOTAL Coverage 0.4230769342.3%
setJobId(String) : void   setJobId(String) : void	3838	1.01	1.01	1.0 1.0100%
setAllowedServerExceptions(int) : void   setAllowedServerExceptions(int) : void	5757	1.01	1.01	1.0 1.0100%
setJobnum(int) : void   setJobnum(int) : void	7272	1.01	1.01	0.0 0.00%
setSubmitted(boolean) : void   setSubmitted(boolean) : void	8181	1.01	1.01	1.0 1.0100%
setSubjobComplete(boolean) : void   setSubjobComplete(boolean) : void	9090	1.01	1.01	1.0 1.0100%
getJobnum() : int   getJobnum() : int	9898	1.01	1.01	0.0 0.00%
getJobId() : String   getJobId() : String	106106	1.01	1.01	0.0 0.00%
isCancelled() : boolean   isCancelled() : boolean	114114	1.01	1.01	0.0 0.00%
getAllowedServerExceptions() : int   getAllowedServerExceptions() : int	122122	1.01	1.01	0.0 0.00%
isSubmitted() : boolean   isSubmitted() : boolean	130130	1.01	1.01	1.0 1.0100%
isSubjobComplete() : boolean   isSubjobComplete() : boolean	138138	1.01	1.01	0.0 0.00%
AWsJob()   AWsJob()	148148	0.00	1.01	-1.0 -1.0 -
_defaultState() : String   _defaultState() : String	224224	2.02	1.01	0.0 0.00%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.3846154	jalview.gui.AssociatePDBFileTest.testAssociatePDBFilejalview.gui.AssociatePDBFileTest.testAssociatePDBFile	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.ws;
22
23		/**
24		* Generic properties for an individual job within a Web Service Client thread.
25		* Derived from jalview web services version 1 statuses, and revised for Jws2.
26		*/
27
		42.3% Uncovered Elements: 15 (26) Complexity: 13 Complexity Density: 1
28		public abstract class AWsJob
29		{
30		protected int jobnum = 0;
31
32		protected String jobId;
33
34		/**
35		* @param jobId
36		* the jobId to set
37		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
38	1	public void setJobId(String jobId)...
39		{
40	1	this.jobId = jobId;
41		}
42
43		/**
44		* has job been cancelled
45		*/
46		protected boolean cancelled = false;
47
48		/**
49		* number of exceptions left before job dies
50		*/
51		int allowedServerExceptions = 3;
52
53		/**
54		* @param allowedServerExceptions
55		* the allowedServerExceptions to set
56		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
57	1	public void setAllowedServerExceptions(int allowedServerExceptions)...
58		{
59	1	this.allowedServerExceptions = allowedServerExceptions;
60		}
61
62		/**
63		* has job been submitted to server ? if false, then no state info is
64		* available.
65		*/
66		protected boolean submitted = false;
67
68		/**
69		* @param jobnum
70		* the jobnum to set
71		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
72	0	public void setJobnum(int jobnum)...
73		{
74	0	this.jobnum = jobnum;
75		}
76
77		/**
78		* @param submitted
79		* the submitted to set
80		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
81	1	public void setSubmitted(boolean submitted)...
82		{
83	1	this.submitted = submitted;
84		}
85
86		/**
87		* @param subjobComplete
88		* the subjobComplete to set
89		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
90	1	public void setSubjobComplete(boolean subjobComplete)...
91		{
92	1	this.subjobComplete = subjobComplete;
93		}
94
95		/**
96		* @return the jobnum
97		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
98	0	public int getJobnum()...
99		{
100	0	return jobnum;
101		}
102
103		/**
104		* @return the jobId
105		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
106	0	public String getJobId()...
107		{
108	0	return jobId;
109		}
110
111		/**
112		* @return the cancelled
113		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
114	0	public boolean isCancelled()...
115		{
116	0	return cancelled;
117		}
118
119		/**
120		* @return the allowedServerExceptions
121		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
122	0	public int getAllowedServerExceptions()...
123		{
124	0	return allowedServerExceptions;
125		}
126
127		/**
128		* @return the submitted
129		*/
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
130	1	public boolean isSubmitted()...
131		{
132	1	return submitted;
133		}
134
135		/**
136		* @return the subjobComplete
137		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
138	0	public boolean isSubjobComplete()...
139		{
140	0	return subjobComplete;
141		}
142
143		/**
144		* are all sub-jobs complete
145		*/
146		protected boolean subjobComplete = false;
147
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
148	3	public AWsJob()...
149		{
150		}
151
152		/**
153		*
154		* @return true if job has completed and valid results are available
155		*/
156		abstract public boolean hasResults();
157
158		/**
159		*
160		* @return boolean true if job can be submitted.
161		*/
162		public abstract boolean hasValidInput();
163
164		/**
165		*
166		* @return true if job is running
167		*/
168		abstract public boolean isRunning();
169
170		/**
171		*
172		* @return true if job is queued
173		*/
174		abstract public boolean isQueued();
175
176		/**
177		*
178		* @return true if job has finished
179		*/
180		abstract public boolean isFinished();
181
182		/**
183		*
184		* @return true if the job failed due to some problem with the input data or
185		* parameters.
186		*/
187		abstract public boolean isFailed();
188
189		/**
190		*
191		* @return true if job failed due to an unhandled technical issue
192		*/
193		abstract public boolean isBroken();
194
195		/**
196		*
197		* @return true if there was a problem contacting the server.
198		*/
199		abstract public boolean isServerError();
200
201		/**
202		*
203		* @return true if the job has status text.
204		*/
205		abstract public boolean hasStatus();
206
207		/**
208		*
209		* @return status text for job to be displayed to user.
210		*/
211		abstract public String getStatus();
212
213		abstract public boolean hasResponse();
214
215		abstract public void clearResponse();
216
217		abstract public String getState();
218
219		/**
220		* generates response using the abstract service flags.
221		*
222		* @return a standard state response
223		*/
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
224	0	protected String _defaultState()...
225		{
226
227	0	String state = "";
228	0	return state;
229		}
230		}