Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
Sequence	23	30	15	0.00%	Show methods

Class Sequence

Class Sequence	Line # 23	Total Statements 30	Complexity 15	TOTAL Coverage 0.00%
Sequence()   Sequence()	2929	0.00	1.01	-1.0 -1.0 -
Sequence(java.lang.String,java.lang.String)   Sequence(java.lang.String,java.lang.String)	3333	2.02	1.01	0.0 0.00%
getId() : java.lang.String   getId() : java.lang.String	4444	1.01	1.01	0.0 0.00%
setId(java.lang.String) : void   setId(java.lang.String) : void	5454	1.01	1.01	0.0 0.00%
getSeq() : java.lang.String   getSeq() : java.lang.String	6464	1.01	1.01	0.0 0.00%
setSeq(java.lang.String) : void   setSeq(java.lang.String) : void	7474	1.01	1.01	0.0 0.00%
equals(java.lang.Object) : boolean   equals(java.lang.Object) : boolean	8181	14.014	5.05	0.0 0.00%
hashCode() : int   hashCode() : int	115115	10.010	4.04	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package vamsas.objects.simple;
22
		0% Uncovered Elements: 52 (52) Complexity: 15 Complexity Density: 0.5
23		public class Sequence implements java.io.Serializable
24		{
25		private java.lang.String id;
26
27		private java.lang.String seq;
28
		- Uncovered Elements: 0 (0) Complexity: 1 Complexity Density: -
29	0	public Sequence()...
30		{
31		}
32
		0% Uncovered Elements: 2 (2) Complexity: 1 Complexity Density: 0.5
33	0	public Sequence(java.lang.String id, java.lang.String seq)...
34		{
35	0	this.id = id;
36	0	this.seq = seq;
37		}
38
39		/**
40		* Gets the id value for this Sequence.
41		*
42		* @return id
43		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
44	0	public java.lang.String getId()...
45		{
46	0	return id;
47		}
48
49		/**
50		* Sets the id value for this Sequence.
51		*
52		* @param id
53		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
54	0	public void setId(java.lang.String id)...
55		{
56	0	this.id = id;
57		}
58
59		/**
60		* Gets the seq value for this Sequence.
61		*
62		* @return seq
63		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
64	0	public java.lang.String getSeq()...
65		{
66	0	return seq;
67		}
68
69		/**
70		* Sets the seq value for this Sequence.
71		*
72		* @param seq
73		*/
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
74	0	public void setSeq(java.lang.String seq)...
75		{
76	0	this.seq = seq;
77		}
78
79		private java.lang.Object __equalsCalc = null;
80
		0% Uncovered Elements: 22 (22) Complexity: 5 Complexity Density: 0.36
81	0	@Override...
82		public synchronized boolean equals(java.lang.Object obj)
83		{
84	0	if (obj == null)
85		{
86	0	return false;
87		}
88	0	if (!(obj instanceof Sequence))
89		{
90	0	return false;
91		}
92	0	Sequence other = (Sequence) obj;
93	0	if (this == obj)
94		{
95	0	return true;
96		}
97	0	if (__equalsCalc != null)
98		{
99	0	return (__equalsCalc == obj);
100		}
101	0	__equalsCalc = obj;
102	0	boolean _equals;
103	0	_equals = true
104		&& ((this.id == null && other.getId() == null)
105		|| (this.id != null && this.id.equals(other.getId())))
106		&& ((this.seq == null && other.getSeq() == null)
107		|| (this.seq != null
108		&& this.seq.equals(other.getSeq())));
109	0	__equalsCalc = null;
110	0	return _equals;
111		}
112
113		private boolean __hashCodeCalc = false;
114
		0% Uncovered Elements: 16 (16) Complexity: 4 Complexity Density: 0.4
115	0	@Override...
116		public synchronized int hashCode()
117		{
118	0	if (__hashCodeCalc)
119		{
120	0	return 0;
121		}
122	0	__hashCodeCalc = true;
123	0	int _hashCode = 1;
124	0	if (getId() != null)
125		{
126	0	_hashCode += getId().hashCode();
127		}
128	0	if (getSeq() != null)
129		{
130	0	_hashCode += getSeq().hashCode();
131		}
132	0	__hashCodeCalc = false;
133	0	return _hashCode;
134		}
135
136		}