Coverage Report
File EbiFileRetrievedProxy.java
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0% of files have more coverage
Classes
| Class | Line # | Actions | |||
|---|---|---|---|---|---|
| EbiFileRetrievedProxy | 29 | 15 | 6 |
Contributing tests
Source view
| 1 | /* | |
| 2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
| 3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
| 4 | * | |
| 5 | * This file is part of Jalview. | |
| 6 | * | |
| 7 | * Jalview is free software: you can redistribute it and/or | |
| 8 | * modify it under the terms of the GNU General Public License | |
| 9 | * as published by the Free Software Foundation, either version 3 | |
| 10 | * of the License, or (at your option) any later version. | |
| 11 | * | |
| 12 | * Jalview is distributed in the hope that it will be useful, but | |
| 13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
| 14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
| 15 | * PURPOSE. See the GNU General Public License for more details. | |
| 16 | * | |
| 17 | * You should have received a copy of the GNU General Public License | |
| 18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
| 19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
| 20 | */ | |
| 21 | package jalview.ws.dbsources; | |
| 22 | ||
| 23 | import jalview.ws.seqfetcher.DbSourceProxyImpl; | |
| 24 | ||
| 25 | import java.io.BufferedReader; | |
| 26 | import java.io.File; | |
| 27 | import java.io.FileReader; | |
| 28 | ||
| 29 | public abstract class EbiFileRetrievedProxy extends DbSourceProxyImpl | |
| 30 | { | |
| 31 | ||
| 32 | /** | |
| 33 | * temp path to retrieved file | |
| 34 | */ | |
| 35 | protected String file = null; | |
| 36 | ||
| 37 | 0 |  public StringBuffer getRawRecords() |
| 38 | { | |
| 39 | 0 | if (file == null) |
| 40 | { | |
| 41 | 0 | return null; |
| 42 | } | |
| 43 | 0 | StringBuffer bf = null; |
| 44 | 0 | try |
| 45 | { | |
| 46 | 0 | File f = new File(file); |
| 47 | 0 | if (f.exists()) |
| 48 | { | |
| 49 | 0 | bf = new StringBuffer(); |
| 50 | 0 | BufferedReader breader = new BufferedReader(new FileReader(f)); |
| 51 | 0 | String line = null; |
| 52 | 0 | while (breader.ready() && (line = breader.readLine()) != null) |
| 53 | { | |
| 54 | 0 | bf.append(line); |
| 55 | } | |
| 56 | 0 | breader.close(); |
| 57 | } | |
| 58 | } catch (Exception e) | |
| 59 | { | |
| 60 | 0 | jalview.bin.Console |
| 61 | .errPrintln("Warning: problems reading temp file " + file); | |
| 62 | 0 | return null; |
| 63 | } | |
| 64 | 0 | return bf; |
| 65 | } | |
| 66 | ||
| 67 | } |