Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
AtomSpecModelTest	31	28	1	0.00%	Show methods

Class AtomSpecModelTest

Class AtomSpecModelTest	Line # 31	Total Statements 28	Complexity 1	TOTAL Coverage 0.00%
testGetRanges() : void   testGetRanges() : void	3333	28.028	1.01	0.0 0.00%

 

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1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.structure;
22
23		import static org.testng.Assert.assertEquals;
24		import static org.testng.Assert.assertFalse;
25		import static org.testng.Assert.assertTrue;
26
27		import java.util.List;
28
29		import org.testng.annotations.Test;
30
		0% Uncovered Elements: 29 (29) Complexity: 1 Complexity Density: 0.04
31		public class AtomSpecModelTest
32		{
		0% Uncovered Elements: 28 (28) Complexity: 1 Complexity Density: 0.04 4-
33	0	@Test(groups = "Functional")...
34		public void testGetRanges()
35		{
36	0	AtomSpecModel model = new AtomSpecModel();
37	0	assertFalse(model.getModels().iterator().hasNext());
38	0	List<int[]> ranges = model.getRanges("1", "A");
39	0	assertTrue(ranges.isEmpty());
40
41	0	model.addRange("1", 12, 14, "A");
42	0	assertTrue(model.getRanges("1", "B").isEmpty());
43	0	assertTrue(model.getRanges("2", "A").isEmpty());
44	0	ranges = model.getRanges("1", "A");
45	0	assertEquals(ranges.size(), 1);
46	0	int[] range = ranges.get(0);
47	0	assertEquals(range[0], 12);
48	0	assertEquals(range[1], 14);
49
50		/*
51		* add some ranges; they should be coalesced and
52		* ordered when retrieved
53		*/
54	0	model.addRange("1", 25, 25, "A");
55	0	model.addRange("1", 20, 24, "A");
56	0	model.addRange("1", 6, 8, "A");
57	0	model.addRange("1", 13, 18, "A");
58	0	model.addRange("1", 5, 6, "A");
59	0	ranges = model.getRanges("1", "A");
60	0	assertEquals(ranges.size(), 3);
61	0	range = ranges.get(0);
62	0	assertEquals(range[0], 5);
63	0	assertEquals(range[1], 8);
64	0	range = ranges.get(1);
65	0	assertEquals(range[0], 12);
66	0	assertEquals(range[1], 18);
67	0	range = ranges.get(2);
68	0	assertEquals(range[0], 20);
69	0	assertEquals(range[1], 25);
70		}
71		}