Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
AllColsCollection	27	6	4	0.880%	Show methods

Class AllColsCollection

Class AllColsCollection	Line # 27	Total Statements 6	Complexity 4	TOTAL Coverage 0.880%
AllColsCollection(int,int,AlignmentI)   AllColsCollection(int,int,AlignmentI)	3535	3.03	1.01	1.0 1.0100%
iterator() : Iterator<Integer>   iterator() : Iterator<Integer>	4242	1.01	1.01	1.0 1.0100%
isHidden(int) : boolean   isHidden(int) : boolean	4848	1.01	1.01	0.0 0.00%
hasHidden() : boolean   hasHidden() : boolean	5454	1.01	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

Select all

	Test contribution	Test	Result	Actions
	0.8	jalview.gui.AlignmentPanelTest.testSetOverviewTitle_automaticOverviewjalview.gui.AlignmentPanelTest.testSetOverviewTitle_automaticOverview	1PASS
	0.8	jalview.project.Jalview2xmlTests.testStoreAndRecoverOverviewjalview.project.Jalview2xmlTests.testStoreAndRecoverOverview	1PASS
	0.8	jalview.gui.AlignmentPanelTest.testSetOverviewTitlejalview.gui.AlignmentPanelTest.testSetOverviewTitle	1PASS
	0.2	jalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntryjalview.project.Jalview2xmlTests.testStoreAndRecoverPDBEntry	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.datamodel;
22
23		import jalview.api.AlignmentColsCollectionI;
24
25		import java.util.Iterator;
26
		80% Uncovered Elements: 2 (10) Complexity: 4 Complexity Density: 0.67
27		public class AllColsCollection implements AlignmentColsCollectionI
28		{
29		int start;
30
31		int end;
32
33		HiddenColumns hidden;
34
		100% Uncovered Elements: 0 (3) Complexity: 1 Complexity Density: 0.33
35	27	public AllColsCollection(int s, int e, AlignmentI al)...
36		{
37	27	start = s;
38	27	end = e;
39	27	hidden = al.getHiddenColumns();
40		}
41
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
42	195	@Override...
43		public Iterator<Integer> iterator()
44		{
45	195	return new AllColsIterator(start, end, hidden);
46		}
47
		0% Uncovered Elements: 1 (1) Complexity: 1 Complexity Density: 1
48	0	@Override...
49		public boolean isHidden(int c)
50		{
51	0	return !hidden.isVisible(c);
52		}
53
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
54	14	@Override...
55		public boolean hasHidden()
56		{
57	14	return hidden.hasHiddenColumns();
58		}
59		}