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Coverage Report

  1. Project Clover database Tue Oct 29 2024 21:36:55 GMT
  2. Package jalview.schemes

File HelixColourScheme.java

 

Coverage histogram

../../img/srcFileCovDistChart10.png
0% of files have more coverage

Code metrics

0
5
5
1
64
33
5
1
1
5
1

Classes

Class Line # Actions
HelixColourScheme 28 5 5
1.0100%
 

Contributing tests

This file is covered by 192 tests. .

Source view

1    /*
2    * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3    * Copyright (C) $$Year-Rel$$ The Jalview Authors
4    *
5    * This file is part of Jalview.
6    *
7    * Jalview is free software: you can redistribute it and/or
8    * modify it under the terms of the GNU General Public License
9    * as published by the Free Software Foundation, either version 3
10    * of the License, or (at your option) any later version.
11    *
12    * Jalview is distributed in the hope that it will be useful, but
13    * WITHOUT ANY WARRANTY; without even the implied warranty
14    * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15    * PURPOSE. See the GNU General Public License for more details.
16    *
17    * You should have received a copy of the GNU General Public License
18    * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19    * The Jalview Authors are detailed in the 'AUTHORS' file.
20    */
21    package jalview.schemes;
22   
23    import jalview.api.AlignViewportI;
24    import jalview.datamodel.AnnotatedCollectionI;
25   
26    import java.awt.Color;
27   
 
28    public class HelixColourScheme extends ScoreColourScheme
29    {
 
30  68 toggle public HelixColourScheme()
31    {
32  68 super(ResidueProperties.aaIndex, ResidueProperties.helix,
33    ResidueProperties.helixmin, ResidueProperties.helixmax);
34    }
35   
 
36  1632 toggle @Override
37    public Color makeColour(float c)
38    {
39  1632 return new Color(c, (float) 1.0 - c, c);
40    }
41   
 
42  936 toggle @Override
43    public boolean isPeptideSpecific()
44    {
45  936 return true;
46    }
47   
 
48  626 toggle @Override
49    public String getSchemeName()
50    {
51  626 return JalviewColourScheme.Helix.toString();
52    }
53   
54    /**
55    * Returns a new instance of this colour scheme with which the given data may
56    * be coloured
57    */
 
58  9 toggle @Override
59    public ColourSchemeI getInstance(AlignViewportI view,
60    AnnotatedCollectionI coll)
61    {
62  9 return new HelixColourScheme();
63    }
64    }
  • Report generated by OpenClover v 4.4.1 on Tue Oct 29 2024 21:44:08 GMT using coverage data from Tue Oct 29 2024 21:43:45 GMT.
  • OpenClover is free and open-source software.