Classes

Class	Line #	Total Statements	Complexity	TOTAL Coverage	Actions
PfamSeedTest	30	7	2	1.0100%	Show methods

Class PfamSeedTest

Class PfamSeedTest	Line # 30	Total Statements 7	Complexity 2	TOTAL Coverage 1.0100%
setUp() : void   setUp() : void	3232	1.01	1.01	1.0 1.0100%
testGetURL() : void   testGetURL() : void	3838	6.06	1.01	1.0 1.0100%

 

Contributing tests

Contributing tests

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	Test contribution	Test	Result	Actions
	0.7777778	jalview.ws.dbsources.PfamSeedTest.testGetURLjalview.ws.dbsources.PfamSeedTest.testGetURL	1PASS

 

Source view

1		/*
2		* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3		* Copyright (C) $$Year-Rel$$ The Jalview Authors
4		*
5		* This file is part of Jalview.
6		*
7		* Jalview is free software: you can redistribute it and/or
8		* modify it under the terms of the GNU General Public License
9		* as published by the Free Software Foundation, either version 3
10		* of the License, or (at your option) any later version.
11		*
12		* Jalview is distributed in the hope that it will be useful, but
13		* WITHOUT ANY WARRANTY; without even the implied warranty
14		* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15		* PURPOSE. See the GNU General Public License for more details.
16		*
17		* You should have received a copy of the GNU General Public License
18		* along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19		* The Jalview Authors are detailed in the 'AUTHORS' file.
20		*/
21		package jalview.ws.dbsources;
22
23		import static org.testng.Assert.assertEquals;
24
25		import org.testng.annotations.BeforeClass;
26		import org.testng.annotations.Test;
27
28		import jalview.bin.Cache;
29
		100% Uncovered Elements: 0 (9) Complexity: 2 Complexity Density: 0.29
30		public class PfamSeedTest
31		{
		100% Uncovered Elements: 0 (1) Complexity: 1 Complexity Density: 1
32	1	@BeforeClass(alwaysRun = true)...
33		public void setUp()
34		{
35	1	Cache.loadProperties("test/jalview/io/testProps.jvprops");
36		}
37
		100% Uncovered Elements: 0 (6) Complexity: 1 Complexity Density: 0.17 1PASS
38	1	@Test(groups = "Functional")...
39		public void testGetURL()
40		{
41	1	String path = "www.ebi.ac.uk/interpro/api/entry/pfam/ABC/?annotation=alignment:seed";
42
43		// with default value for domain
44	1	String url = new PfamSeed().getURL(" abc ");
45	1	assertEquals(url, "https://" + path);
46
47		// with override in properties
48	1	Cache.setProperty(Pfam.PFAM_BASEURL_KEY,
49		"http://www.ebi.ac.uk/interpro/api/entry/pfam/$PFAMID$/?annotation=alignment:$ALTYPE$");
50	1	url = new PfamSeed().getURL(" abc ");
51	1	assertEquals(url, "http://" + path);
52		}
53		}