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FileUtilsTest | 31 | 26 | 12 |
1 | /* | |
2 | * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) | |
3 | * Copyright (C) $$Year-Rel$$ The Jalview Authors | |
4 | * | |
5 | * This file is part of Jalview. | |
6 | * | |
7 | * Jalview is free software: you can redistribute it and/or | |
8 | * modify it under the terms of the GNU General Public License | |
9 | * as published by the Free Software Foundation, either version 3 | |
10 | * of the License, or (at your option) any later version. | |
11 | * | |
12 | * Jalview is distributed in the hope that it will be useful, but | |
13 | * WITHOUT ANY WARRANTY; without even the implied warranty | |
14 | * of MERCHANTABILITY or FITNESS FOR A PARTICULAR | |
15 | * PURPOSE. See the GNU General Public License for more details. | |
16 | * | |
17 | * You should have received a copy of the GNU General Public License | |
18 | * along with Jalview. If not, see <http://www.gnu.org/licenses/>. | |
19 | * The Jalview Authors are detailed in the 'AUTHORS' file. | |
20 | */ | |
21 | package jalview.util; | |
22 | ||
23 | import java.io.File; | |
24 | import java.util.List; | |
25 | ||
26 | import org.testng.Assert; | |
27 | import org.testng.annotations.DataProvider; | |
28 | import org.testng.annotations.Test; | |
29 | ||
30 | @Test | |
31 | public class FileUtilsTest | |
32 | { | |
33 | 11 | @Test(groups = "Functional", dataProvider = "patternsAndMinNumFiles") |
34 | public void testJavaFileGlob(String pattern, int atLeast, int atMost) | |
35 | { | |
36 | 11 | List<File> files = FileUtils.getFilesFromGlob(pattern); |
37 | 11 | if (atLeast != -1) |
38 | { | |
39 | 11 | Assert.assertTrue(files.size() > atLeast, |
40 | "Did not find more than " + atLeast + " files with " + pattern | |
41 | + " (found " + files.size() + ")"); | |
42 | } | |
43 | 11 | if (atLeast != -1) |
44 | { | |
45 | 11 | Assert.assertTrue(files.size() > atLeast, |
46 | "Did not find more than " + atLeast + " files with " + pattern | |
47 | + " (found " + files.size() + ")"); | |
48 | } | |
49 | 11 | if (atMost != -1) |
50 | { | |
51 | 11 | Assert.assertTrue(files.size() < atMost, |
52 | "Did not find fewer than " + atMost + " files with " + pattern | |
53 | + " (found " + files.size() + ")"); | |
54 | } | |
55 | } | |
56 | ||
57 | 4 | @Test(groups = "Functional", dataProvider = "dirnamesAndBasenames") |
58 | public void testDirnamesAndBasenames(String filename, String dirname, | |
59 | String endsWith, String basename, String notInDirname) | |
60 | { | |
61 | 4 | File file = new File(filename); |
62 | 4 | String d = FileUtils.getDirname(file); |
63 | 4 | String b = FileUtils.getBasename(file); |
64 | 4 | Assert.assertEquals(b, basename); |
65 | 4 | Assert.assertTrue(d.startsWith(dirname), "getDirname(" + file.getPath() |
66 | + ")=" + d + " didn't start with '" + dirname + "'"); | |
67 | 4 | Assert.assertTrue(d.endsWith(endsWith), "getDirname(" + file.getPath() |
68 | + ")=" + d + " didn't end with '" + endsWith + "'"); | |
69 | ||
70 | // ensure dirname doesn't end with basename (which means you can't use same | |
71 | // filename as dir in tests!) | |
72 | 4 | Assert.assertFalse(d.endsWith(b), "Processed dirname '" + d |
73 | + "' ends with '" + b + "' when it shouldn't"); | |
74 | ||
75 | 4 | if (notInDirname != null) |
76 | 4 | Assert.assertFalse(d.contains(notInDirname), "Processed directory '" |
77 | + d + "' contains '" + notInDirname + "' when it shouldn't"); | |
78 | } | |
79 | ||
80 | /** | |
81 | * these need to be maintained as jalview's source base grows | |
82 | * | |
83 | * @return | |
84 | */ | |
85 | 1 | @DataProvider(name = "patternsAndMinNumFiles") |
86 | public Object[][] patternsAndMinNumFiles() | |
87 | { | |
88 | 1 | return new Object[][] { { "src/**/*.java", 900, 100000 }, |
89 | { "src/**.java", 900, 100000 }, | |
90 | { "test/**/*.java", 250, 2500 }, | |
91 | { "test/**.java", 250, 2500 }, | |
92 | { "help/**/*.html", 100, 1000 }, | |
93 | { "test/**/F*.java", 15, 150 }, | |
94 | { "test/jalview/*/F*.java", 10, 15 }, // 12 at time of writing | |
95 | { "test/jalview/**/F*.java", 18, 30 }, // 20 at time of writing | |
96 | { "test/jalview/util/F**.java", 1, 5 }, // 2 at time of writing | |
97 | { "src/jalview/b*/*.java", 14, 19 }, // 15 at time of writing | |
98 | { "src/jalview/b**/*.java", 23, 26 }, // 22 at time of writing | |
99 | }; | |
100 | } | |
101 | ||
102 | 1 | @DataProvider(name = "dirnamesAndBasenames") |
103 | public Object[][] dirnamesAndBasenames() | |
104 | { | |
105 | 1 | String homeDir = new File(System.getProperty("user.home")).getPath(); |
106 | 1 | return new Object[][] { // -1=startsWith, 0=equals, 1=endsWith |
107 | { "~/hello/sailor", homeDir, "/hello", "sailor", "~" }, // | |
108 | { "./examples/uniref50.fa", "./", "examples", "uniref50", "Users" }, // | |
109 | { "./examples/uniref50.1.fa", "./", "examples", "uniref50.1", | |
110 | "Users" }, // | |
111 | { "examples/uniref50.fa", "examples", "examples", "uniref50", | |
112 | ".fa" }, // | |
113 | }; | |
114 | } | |
115 | ||
116 | 16 | @Test(groups = "Functional", dataProvider = "convertWildcardsToPathData") |
117 | public void convertWildcardsToPathTest(String value, String wildcard, | |
118 | String dirname, String basename, String path) | |
119 | { | |
120 | ||
121 | 16 | Assert.assertEquals( |
122 | FileUtils.convertWildcardsToPath(value, wildcard, dirname, | |
123 | basename), | |
124 | path, "Conversion of wildcard output path is not right."); | |
125 | ||
126 | } | |
127 | ||
128 | 1 | @DataProvider(name = "convertWildcardsToPathData") |
129 | public Object[][] convertWildcardsToPathData() | |
130 | { | |
131 | 1 | return new Object[][] { |
132 | /* | |
133 | * cmdline args | |
134 | * Arg (null if only testing headless) | |
135 | * String value if there is one (null otherwise) | |
136 | * boolean value if String value is null | |
137 | * expected value of isHeadless() | |
138 | */ | |
139 | /* | |
140 | */ | |
141 | { "*/*", "*", "{dirname}", "{basename}", "{dirname}/{basename}" }, | |
142 | { "*/", "*", "{dirname}", "{basename}", "{dirname}/" }, | |
143 | { "/*", "*", "{dirname}", "{basename}", "/{basename}" }, | |
144 | { "*", "*", "{dirname}", "{basename}", "{basename}" }, | |
145 | { "tmp/output/*/file-*.stk", "*", "{dirname}", "{basename}", | |
146 | "tmp/output/{dirname}/file-{basename}.stk" }, | |
147 | { "/*.file", "*", "{dirname}", "{basename}", "/{basename}.file" }, | |
148 | { "*/file.stk", "*", "{dirname}", "{basename}", | |
149 | "{dirname}/file.stk" }, | |
150 | { "tmp/abc*def/file.stk", "*", "{dirname}", "{basename}", | |
151 | "tmp/abc{dirname}def/file.stk" }, | |
152 | { "a*b/c*d", "*", "{dirname}", "{basename}", | |
153 | "a{dirname}b/c{basename}d" }, | |
154 | { "a*b/c", "*", "{dirname}", "{basename}", "a{dirname}b/c" }, | |
155 | { "a/b*c", "*", "{dirname}", "{basename}", "a/b{basename}c" }, | |
156 | { "a*b", "*", "{dirname}", "{basename}", "a{basename}b" }, | |
157 | { "aSTARb/cSTARd", "STAR", "BEFORE", "AFTER", "aBEFOREb/cAFTERd" }, | |
158 | { "aSTARb/c", "STAR", "BEFORE", "AFTER", "aBEFOREb/c" }, | |
159 | { "a/bSTARc", "STAR", "BEFORE", "AFTER", "a/bAFTERc" }, | |
160 | { "aSTARb", "STAR", "BEFORE", "AFTER", "aAFTERb" }, | |
161 | // | |
162 | }; | |
163 | } | |
164 | ||
165 | 15 | @Test( |
166 | groups = "Functional", | |
167 | dataProvider = "stringFilenamesBaseAndExtensionsData") | |
168 | public void stringGetBaseAndExtensionTest(String filename, | |
169 | String extension, String base) | |
170 | { | |
171 | 15 | String thisBase = FileUtils.getBase(filename); |
172 | 15 | Assert.assertEquals(thisBase, base, |
173 | "base part of path and filename not as expected"); | |
174 | 15 | String thisExtension = FileUtils.getExtension(filename); |
175 | 15 | Assert.assertEquals(thisExtension, extension, |
176 | "extension part of filename not as expected"); | |
177 | } | |
178 | ||
179 | 1 | @DataProvider(name = "stringFilenamesBaseAndExtensionsData") |
180 | public Object[][] stringFilenamesBaseAndExtensionsData() | |
181 | { | |
182 | 1 | return new Object[][] { |
183 | /* | |
184 | * String full URL or path | |
185 | * String base the above but without the extension if there is one | |
186 | * String extension the filename extension if there is one | |
187 | */ | |
188 | /* | |
189 | */ | |
190 | { "/examples/uniref50.fa", "fa", "/examples/uniref50." }, | |
191 | { "/examples/uniref50", null, "/examples/uniref50" }, | |
192 | { "/examples/.uniref50", null, "/examples/.uniref50" }, | |
193 | { "/exampl.es/uniref50", null, "/exampl.es/uniref50" }, | |
194 | { "/examples/uniref50.", "", "/examples/uniref50." }, | |
195 | { "examples/uniref50.fa", "fa", "examples/uniref50." }, | |
196 | { "examples/uniref50", null, "examples/uniref50" }, | |
197 | { "examples/.uniref50", null, "examples/.uniref50" }, | |
198 | { "exampl.es/uniref50", null, "exampl.es/uniref50" }, | |
199 | { "examples/uniref50.", "", "examples/uniref50." }, | |
200 | { "https://www.jalview.org:443/examples/uniref50.fa", "fa", | |
201 | "https://www.jalview.org:443/examples/uniref50." }, | |
202 | { "https://www.jalview.org:443/examples/uniref50", null, | |
203 | "https://www.jalview.org:443/examples/uniref50" }, | |
204 | { "https://www.jalview.org:443/examples/.uniref50", null, | |
205 | "https://www.jalview.org:443/examples/.uniref50" }, | |
206 | { "https://www.jalview.org:443/exampl.es/uniref50", null, | |
207 | "https://www.jalview.org:443/exampl.es/uniref50" }, | |
208 | { "https://www.jalview.org:443/examples/uniref50.", "", | |
209 | "https://www.jalview.org:443/examples/uniref50." }, | |
210 | /* | |
211 | */ | |
212 | // | |
213 | }; | |
214 | } | |
215 | } |