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  1. Project Clover database Fri Dec 6 2024 13:47:14 GMT
  2. Package ext.edu.ucsf.rbvi.strucviz2

File ChimeraStructuralObject.java

 

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Classes

Class Line # Actions
ChimeraStructuralObject 45 0 0
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1    /* vim: set ts=2: */
2    /**
3    * Copyright (c) 2006 The Regents of the University of California.
4    * All rights reserved.
5    *
6    * Redistribution and use in source and binary forms, with or without
7    * modification, are permitted provided that the following conditions
8    * are met:
9    * 1. Redistributions of source code must retain the above copyright
10    * notice, this list of conditions, and the following disclaimer.
11    * 2. Redistributions in binary form must reproduce the above
12    * copyright notice, this list of conditions, and the following
13    * disclaimer in the documentation and/or other materials provided
14    * with the distribution.
15    * 3. Redistributions must acknowledge that this software was
16    * originally developed by the UCSF Computer Graphics Laboratory
17    * under support by the NIH National Center for Research Resources,
18    * grant P41-RR01081.
19    *
20    * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDER "AS IS" AND ANY
21    * EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
22    * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
23    * PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS BE LIABLE
24    * FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
25    * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT
26    * OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
27    * BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
28    * WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
29    * OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE,
30    * EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
31    *
32    */
33    package ext.edu.ucsf.rbvi.strucviz2;
34   
35    import java.util.List;
36   
37    /**
38    * This interface provides a common set of methods that are implemented by the
39    * ChimeraModel, ChimeraChain, and ChimeraResidue classes.
40    *
41    * @author scooter
42    *
43    */
44   
 
45    public interface ChimeraStructuralObject
46    {
47   
48    /**
49    * Return the Chimera selection specification for this object
50    *
51    * @return a String representing a Chimera atom-spec
52    */
53    public String toSpec();
54   
55    /**
56    * Return a String representation for this object
57    *
58    * @return a String representing the object name
59    */
60    public String toString();
61   
62    /**
63    * Return the userData for this object
64    *
65    * @return an Object representing the userData (usually TreePath)
66    */
67    public Object getUserData();
68   
69    /**
70    * Set the userData for this object
71    *
72    * @param userData
73    * the Object representing the userData (usually TreePath)
74    */
75    public void setUserData(Object userData);
76   
77    /**
78    * Return the ChimeraModel for this object
79    *
80    * @return the ChimeraModel this object is part of
81    */
82    public ChimeraModel getChimeraModel();
83   
84    /**
85    * Set the "selected" state of this object
86    *
87    * @param selected
88    * boolean value as to whether this object is selected
89    */
90    public void setSelected(boolean selected);
91   
92    /**
93    * Get the "selected" state of this object
94    *
95    * @return the selected state of this object
96    */
97    public boolean isSelected();
98   
99    /**
100    * Get the selected state of this object and its children.
101    *
102    * @return true if any child is selected.
103    */
104    public boolean hasSelectedChildren();
105   
106    /**
107    * Get the children of this object (if any)
108    *
109    * @return the children of the object
110    */
111    public List<ChimeraStructuralObject> getChildren();
112    }